JAL-3442 colour caching for Overview resize

[jalview.git] / src / jalview / gui / AlignmentPanel.java

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index 2f5d83b..22bb89f 100644 (file)
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -834,6 +834,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
             av.isShowAutocalculatedAbove());
     sorter.sort(getAlignment().getAlignmentAnnotation(),
             av.getSortAnnotationsBy());
+    getAlignment().resetColors();
     repaint();
 
     if (updateStructures)
@@ -842,7 +843,6 @@ public class AlignmentPanel extends GAlignmentPanel implements
     }
     if (updateOverview)
     {
-
       if (overviewPanel != null)
       {
         overviewPanel.updateOverviewImage();