JAL-1432 updated copyright notices

[jalview.git] / src / jalview / gui / AnnotationLabels.java

diff --git a/src/jalview/gui/AnnotationLabels.java b/src/jalview/gui/AnnotationLabels.java
index 7d8a596..1f437dd 100755 (executable)
--- a/src/jalview/gui/AnnotationLabels.java
+++ b/src/jalview/gui/AnnotationLabels.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -14,6 +14,7 @@
  * PURPOSE.  See the GNU General Public License for more details.
  * 
  * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.gui;
 
@@ -882,8 +883,6 @@ public class AnnotationLabels extends JPanel implements MouseListener,
       for (int i = 0; i < aa.length; i++)
       {
         visible = true;
-        g.setColor(Color.black);
-
         if (!aa[i].visible)
         {
           hasHiddenRows = true;
@@ -916,6 +915,8 @@ public class AnnotationLabels extends JPanel implements MouseListener,
           // don't draw what isn't visible
           continue;
         }}
+        g.setColor(Color.black);
+
         offset = -aa[i].height / 2;
 
         if (aa[i].hasText)
@@ -931,6 +932,7 @@ public class AnnotationLabels extends JPanel implements MouseListener,
         if (aa[i].graphGroup > -1)
         {
           int groupSize = 0;
+          // TODO: JAL-1291 revise rendering model so the graphGroup map is computed efficiently for all visible labels
           for (int gg = 0; gg < aa.length; gg++)
           {
             if (aa[gg].graphGroup == aa[i].graphGroup)