Merge branch 'JAL-1483_29dev' into develop

[jalview.git] / src / jalview / gui / AppJmolBinding.java

diff --git a/src/jalview/gui/AppJmolBinding.java b/src/jalview/gui/AppJmolBinding.java
index 7fa300e..42a2f74 100644 (file)
--- a/src/jalview/gui/AppJmolBinding.java
+++ b/src/jalview/gui/AppJmolBinding.java
@@ -58,11 +58,11 @@ public class AppJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
   {
     AlignmentPanel ap = (alignment == null) ? appJmolWindow.ap
             : (AlignmentPanel) alignment;
-    if (ap.av.showSequenceFeatures)
+    if (ap.av.isShowSequenceFeatures())
     {
       if (fr == null)
       {
-        fr = ap.cloneFeatureRenderer();
+        fr = (jalview.gui.FeatureRenderer) ap.cloneFeatureRenderer();
       }
       else
       {
@@ -133,7 +133,7 @@ public class AppJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
       return;
     if (!isLoadingFromArchive())
     {
-      colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+      colourBySequence(ap.av.isShowSequenceFeatures(), ap);
     }
   }