JAL-1483 move show sequence feature and sequence feature height settings to view...

[jalview.git] / src / jalview / gui / AppJmolBinding.java

diff --git a/src/jalview/gui/AppJmolBinding.java b/src/jalview/gui/AppJmolBinding.java
index 35abb94..42a2f74 100644 (file)
--- a/src/jalview/gui/AppJmolBinding.java
+++ b/src/jalview/gui/AppJmolBinding.java
@@ -58,7 +58,7 @@ public class AppJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
   {
     AlignmentPanel ap = (alignment == null) ? appJmolWindow.ap
             : (AlignmentPanel) alignment;
-    if (ap.av.showSequenceFeatures)
+    if (ap.av.isShowSequenceFeatures())
     {
       if (fr == null)
       {
@@ -133,7 +133,7 @@ public class AppJmolBinding extends jalview.ext.jmol.JalviewJmolBinding
       return;
     if (!isLoadingFromArchive())
     {
-      colourBySequence(ap.av.getShowSequenceFeatures(), ap);
+      colourBySequence(ap.av.isShowSequenceFeatures(), ap);
     }
   }