formatting

[jalview.git] / src / jalview / gui / AssociatePdbFileWithSeq.java

diff --git a/src/jalview/gui/AssociatePdbFileWithSeq.java b/src/jalview/gui/AssociatePdbFileWithSeq.java
index 6f36a79..fc2766a 100644 (file)
--- a/src/jalview/gui/AssociatePdbFileWithSeq.java
+++ b/src/jalview/gui/AssociatePdbFileWithSeq.java
@@ -25,35 +25,40 @@ import jalview.datamodel.SequenceI;
 
 /**
  * GUI related routines for associating PDB files with sequences
+ * 
  * @author JimP
- *
+ * 
  */
 public class AssociatePdbFileWithSeq
 {
 
-/**
- * assocate the given PDB file with 
- * @param choice
- * @param sequence
- */
-  public PDBEntry associatePdbWithSeq(String choice, String protocol, SequenceI sequence, boolean prompt)
+  /**
+   * assocate the given PDB file with
+   * 
+   * @param choice
+   * @param sequence
+   */
+  public PDBEntry associatePdbWithSeq(String choice, String protocol,
+          SequenceI sequence, boolean prompt)
   {
     PDBEntry entry = new PDBEntry();
     try
     {
-      MCview.PDBfile pdbfile = new MCview.PDBfile(choice,
-              protocol);
+      MCview.PDBfile pdbfile = new MCview.PDBfile(choice, protocol);
 
       if (pdbfile.id == null)
       {
         String reply = null;
-      
-        if (prompt) { reply = JOptionPane
-                .showInternalInputDialog(
-                        Desktop.desktop,
-                        "Couldn't find a PDB id in the file supplied."
-                                + "Please enter an Id to identify this structure.",
-                        "No PDB Id in File", JOptionPane.QUESTION_MESSAGE);}
+
+        if (prompt)
+        {
+          reply = JOptionPane
+                  .showInternalInputDialog(
+                          Desktop.desktop,
+                          "Couldn't find a PDB id in the file supplied."
+                                  + "Please enter an Id to identify this structure.",
+                          "No PDB Id in File", JOptionPane.QUESTION_MESSAGE);
+        }
         if (reply == null)
         {
           return null;