Formatting changes

[jalview.git] / src / jalview / gui / ColumnSelection.java

diff --git a/src/jalview/gui/ColumnSelection.java b/src/jalview/gui/ColumnSelection.java
index 2116d50..356dd1c 100755 (executable)
--- a/src/jalview/gui/ColumnSelection.java
+++ b/src/jalview/gui/ColumnSelection.java
@@ -20,93 +20,150 @@ package jalview.gui;
 \r
 import java.util.*;\r
 \r
+\r
 /**\r
  * NOTE: Columns are zero based.\r
  */\r
 public class ColumnSelection\r
 {\r
-  Vector selected = new Vector();\r
-\r
-  public void addElement(int col)\r
-  {\r
-    if(!selected.contains(new Integer(col)))\r
-      selected.addElement(new Integer(col));\r
-  }\r
-\r
-  public void clear()\r
-  {\r
-    selected.removeAllElements();\r
-  }\r
-\r
-  public void removeElement(int col)\r
-  {\r
-    Integer colInt = new Integer(col);\r
-    if (selected.contains(colInt))\r
+    Vector selected = new Vector();\r
+\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @param col DOCUMENT ME!\r
+     */\r
+    public void addElement(int col)\r
     {\r
-      selected.removeElement(colInt);\r
+        if (!selected.contains(new Integer(col)))\r
+        {\r
+            selected.addElement(new Integer(col));\r
+        }\r
     }\r
-  }\r
-\r
-  public boolean contains(int col)\r
-  {\r
-    return selected.contains(new Integer(col));\r
-  }\r
 \r
-  public int columnAt(int i)\r
-  {\r
-    return ( (Integer) selected.elementAt(i)).intValue();\r
-  }\r
+    /**\r
+     * DOCUMENT ME!\r
+     */\r
+    public void clear()\r
+    {\r
+        selected.removeAllElements();\r
+    }\r
 \r
-  public int size()\r
-  {\r
-    return selected.size();\r
-  }\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @param col DOCUMENT ME!\r
+     */\r
+    public void removeElement(int col)\r
+    {\r
+        Integer colInt = new Integer(col);\r
 \r
-  public int getMax()\r
-  {\r
-    int max = -1;\r
+        if (selected.contains(colInt))\r
+        {\r
+            selected.removeElement(colInt);\r
+        }\r
+    }\r
 \r
-    for (int i = 0; i < selected.size(); i++)\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @param col DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public boolean contains(int col)\r
     {\r
-      if (columnAt(i) > max)\r
-      {\r
-        max = columnAt(i);\r
-      }\r
+        return selected.contains(new Integer(col));\r
     }\r
 \r
-    return max;\r
-  }\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @param i DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public int columnAt(int i)\r
+    {\r
+        return ((Integer) selected.elementAt(i)).intValue();\r
+    }\r
 \r
-  public int getMin()\r
-  {\r
-    int min = 1000000000;\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public int size()\r
+    {\r
+        return selected.size();\r
+    }\r
 \r
-    for (int i = 0; i < selected.size(); i++)\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public int getMax()\r
     {\r
-      if (columnAt(i) < min)\r
-      {\r
-        min = columnAt(i);\r
-      }\r
+        int max = -1;\r
+\r
+        for (int i = 0; i < selected.size(); i++)\r
+        {\r
+            if (columnAt(i) > max)\r
+            {\r
+                max = columnAt(i);\r
+            }\r
+        }\r
+\r
+        return max;\r
     }\r
 \r
-    return min;\r
-  }\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public int getMin()\r
+    {\r
+        int min = 1000000000;\r
+\r
+        for (int i = 0; i < selected.size(); i++)\r
+        {\r
+            if (columnAt(i) < min)\r
+            {\r
+                min = columnAt(i);\r
+            }\r
+        }\r
 \r
-  public Vector asVector()\r
-  {\r
-    return selected;\r
-  }\r
+        return min;\r
+    }\r
 \r
-  public void compensateForEdit(int start, int change)\r
-  {\r
-    for (int i = 0; i < size(); i++)\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @return DOCUMENT ME!\r
+     */\r
+    public Vector asVector()\r
     {\r
-      int temp = columnAt(i);\r
+        return selected;\r
+    }\r
 \r
-      if (temp >= start)\r
-      {\r
-        selected.setElementAt(new Integer(temp - change), i);\r
-      }\r
+    /**\r
+     * DOCUMENT ME!\r
+     *\r
+     * @param start DOCUMENT ME!\r
+     * @param change DOCUMENT ME!\r
+     */\r
+    public void compensateForEdit(int start, int change)\r
+    {\r
+        for (int i = 0; i < size(); i++)\r
+        {\r
+            int temp = columnAt(i);\r
+\r
+            if (temp >= start)\r
+            {\r
+                selected.setElementAt(new Integer(temp - change), i);\r
+            }\r
+        }\r
     }\r
-  }\r
 }\r