JAL-2446 merged to spike branch

[jalview.git] / src / jalview / gui / Console.java

diff --git a/src/jalview/gui/Console.java b/src/jalview/gui/Console.java
index 4fe45c8..de7574c 100644 (file)
--- a/src/jalview/gui/Console.java
+++ b/src/jalview/gui/Console.java
@@ -1,29 +1,46 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.gui;
 
 import jalview.util.MessageManager;
 
-import java.io.*;
-import java.awt.*;
-import java.awt.event.*;
-import javax.swing.*;
+import java.awt.BorderLayout;
+import java.awt.Dimension;
+import java.awt.GraphicsEnvironment;
+import java.awt.Rectangle;
+import java.awt.Toolkit;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+import java.awt.event.WindowAdapter;
+import java.awt.event.WindowEvent;
+import java.awt.event.WindowListener;
+import java.io.IOException;
+import java.io.PipedInputStream;
+import java.io.PipedOutputStream;
+import java.io.PrintStream;
+
+import javax.swing.JButton;
+import javax.swing.JFrame;
+import javax.swing.JScrollPane;
+import javax.swing.JTextArea;
 
 import org.apache.log4j.SimpleLayout;
 
@@ -67,6 +84,10 @@ public class Console extends WindowAdapter implements WindowListener,
   // are we attached to some parent Desktop
   Desktop parent = null;
 
+  private int MIN_WIDTH = 300;
+
+  private int MIN_HEIGHT = 250;
+
   public Console()
   {
     // create all components and add them
@@ -226,7 +247,9 @@ public class Console extends WindowAdapter implements WindowListener,
             .getLocalGraphicsEnvironment();
     String[] fontNames = ge.getAvailableFontFamilyNames();
     for (int n = 0; n < fontNames.length; n++)
+    {
       System.out.println(fontNames[n]);
+    }
     // Testing part: simple an error thrown anywhere in this JVM will be printed
     // on the Console
     // We do it with a seperate Thread becasue we don't wan't to break a Thread
@@ -242,9 +265,13 @@ public class Console extends WindowAdapter implements WindowListener,
     JFrame frame = new JFrame(string);
     frame.setName(string);
     if (x == -1)
-      x = (int) (i / 2);
+    {
+      x = i / 2;
+    }
     if (y == -1)
-      y = (int) (j / 2);
+    {
+      y = j / 2;
+    }
     frame.setBounds(x, y, i, j);
     return frame;
   }
@@ -281,6 +308,7 @@ public class Console extends WindowAdapter implements WindowListener,
       frame = initFrame("Jalview Java Console", bounds.width,
               bounds.height, bounds.x, bounds.y);
     }
+    frame.setMinimumSize(new Dimension(MIN_WIDTH, MIN_HEIGHT));
     // desktop.add(frame);
     initConsole(false);
     JalviewAppender jappender = new JalviewAppender();
@@ -328,6 +356,7 @@ public class Console extends WindowAdapter implements WindowListener,
     // System.exit(0);
   }
 
+  @Override
   public synchronized void windowClosed(WindowEvent evt)
   {
     frame.setVisible(false);
@@ -348,6 +377,7 @@ public class Console extends WindowAdapter implements WindowListener,
     }
   }
 
+  @Override
   public synchronized void windowClosing(WindowEvent evt)
   {
     frame.setVisible(false); // default behaviour of JFrame
@@ -356,12 +386,14 @@ public class Console extends WindowAdapter implements WindowListener,
     // frame.dispose();
   }
 
+  @Override
   public synchronized void actionPerformed(ActionEvent evt)
   {
     trimBuffer(true);
     // textArea.setText("");
   }
 
+  @Override
   public synchronized void run()
   {
     try
@@ -393,7 +425,9 @@ public class Console extends WindowAdapter implements WindowListener,
           // lines++;
         }
         if (quit)
+        {
           return;
+        }
       }
 
       while (Thread.currentThread() == reader2)
@@ -422,7 +456,9 @@ public class Console extends WindowAdapter implements WindowListener,
           // lines++;
         }
         if (quit)
+        {
           return;
+        }
       }
       while (Thread.currentThread() == textAppender)
       {
@@ -500,7 +536,7 @@ public class Console extends WindowAdapter implements WindowListener,
       {
       }
       throw new NullPointerException(
-              "Application test: throwing an NullPointerException It should arrive at the console");
+              MessageManager.getString("exception.application_test_npe"));
     }
   }
 
@@ -514,6 +550,7 @@ public class Console extends WindowAdapter implements WindowListener,
     long time = System.nanoTime();
     javax.swing.SwingUtilities.invokeLater(new Runnable()
     {
+      @Override
       public void run()
       {
         displayPipe.append(input); // change to stringBuffer
@@ -581,7 +618,9 @@ public class Console extends WindowAdapter implements WindowListener,
     {
       int available = in.available();
       if (available == 0)
+      {
         break;
+      }
       byte b[] = new byte[available];
       in.read(b);
       input = input + new String(b, 0, b.length);