JAL-1641 Further refactoring of JSON export option, introduction of Viewport to the...

[jalview.git] / src / jalview / gui / Desktop.java

diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java
index 9e5bbff..1228965 100644 (file)
--- a/src/jalview/gui/Desktop.java
+++ b/src/jalview/gui/Desktop.java
@@ -26,7 +26,6 @@ import jalview.bin.Cache;
 import jalview.io.FileLoader;
 import jalview.io.FormatAdapter;
 import jalview.io.IdentifyFile;
-import jalview.io.JSONFile;
 import jalview.io.JalviewFileChooser;
 import jalview.io.JalviewFileView;
 import jalview.jbgui.GSplitFrame;
@@ -1025,13 +1024,13 @@ public class Desktop extends jalview.jbgui.GDesktop implements
       {
         new FileLoader().LoadFile(viewport, choice, FormatAdapter.FILE,
                 format);
-        viewport.setShowSequenceFeatures(JSONFile.isSeqFeaturesEnabled());
-        AlignFrame af = viewport.getAlignPanel().alignFrame;
-        if (af != null)
-        {
-          af.changeColour(JSONFile.getColourScheme());
-          af.setMenusForViewport();
-        }
+        // viewport.setShowSequenceFeatures(JSONFile.isSeqFeaturesEnabled());
+        // AlignFrame af = viewport.getAlignPanel().alignFrame;
+        // if (af != null)
+        // {
+        // af.changeColour(JSONFile.getColourScheme());
+        // af.setMenusForViewport();
+        // }
       }
       else
       {
@@ -3084,15 +3083,15 @@ public class Desktop extends jalview.jbgui.GDesktop implements
 
   }
 
-  public static AlignFrame getCurrentAlignFrame()
-  {
-    return currentAlignFrame;
-  }
-
-  public static void setCurrentAlignFrame(AlignFrame currentAlignFrame)
-  {
-    Desktop.currentAlignFrame = currentAlignFrame;
-  }
+  // public static AlignFrame getCurrentAlignFrame()
+  // {
+  // return currentAlignFrame;
+  // }
+  //
+  // public static void setCurrentAlignFrame(AlignFrame currentAlignFrame)
+  // {
+  // Desktop.currentAlignFrame = currentAlignFrame;
+  // }
 
 
 }