JAL-1665 refactored Sequence.getSequenceFeatures

[jalview.git] / src / jalview / gui / FeatureSettings.java

diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java
index 3475fe3..0f44c48 100644 (file)
--- a/src/jalview/gui/FeatureSettings.java
+++ b/src/jalview/gui/FeatureSettings.java
@@ -428,15 +428,13 @@ public class FeatureSettings extends JPanel
     String group;
     for (int i = 0; i < af.getViewport().getAlignment().getHeight(); i++)
     {
-      if (af.getViewport().getAlignment().getSequenceAt(i)
-              .getDatasetSequence().getSequenceFeatures() == null)
+      tmpfeatures = af.getViewport().getAlignment().getSequenceAt(i)
+              .getSequenceFeatures();
+      if (tmpfeatures == null)
       {
         continue;
       }
 
-      tmpfeatures = af.getViewport().getAlignment().getSequenceAt(i)
-              .getDatasetSequence().getSequenceFeatures();
-
       int index = 0;
       while (index < tmpfeatures.length)
       {
@@ -546,7 +544,7 @@ public class FeatureSettings extends JPanel
     {
 
       tmpfeatures = af.getViewport().getAlignment().getSequenceAt(i)
-              .getDatasetSequence().getSequenceFeatures();
+              .getSequenceFeatures();
       if (tmpfeatures == null)
       {
         continue;