JAL-3186 remove ‘Variable Colour’ from the sequence feature settings popup menu

[jalview.git] / src / jalview / gui / FeatureSettings.java

diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java
index b49593a..ac04a1f 100644 (file)
--- a/src/jalview/gui/FeatureSettings.java
+++ b/src/jalview/gui/FeatureSettings.java
@@ -20,6 +20,8 @@
  */
 package jalview.gui;
 
+import java.util.Locale;
+
 import java.awt.BorderLayout;
 import java.awt.Color;
 import java.awt.Component;
@@ -150,7 +152,7 @@ public class FeatureSettings extends JPanel
    */
   Object[][] originalData;
 
-  float originalTransparency;
+  private float originalTransparency;
 
   private ViewStyleI originalViewStyle;
 
@@ -182,7 +184,7 @@ public class FeatureSettings extends JPanel
   /*
    * true when Feature Settings are updating from feature renderer
    */
-  boolean handlingUpdate = false;
+  private boolean handlingUpdate = false;
 
   /*
    * a change listener to ensure the dialog is updated if
@@ -496,81 +498,6 @@ public class FeatureSettings extends JPanel
     JPopupMenu men = new JPopupMenu(MessageManager
             .formatMessage("label.settings_for_param", new String[]
             { type }));
-    final FeatureColourI featureColour = (FeatureColourI) typeCol;
-
-    /*
-     * menu option to select (or deselect) variable colour
-     */
-    final JCheckBoxMenuItem variableColourCB = new JCheckBoxMenuItem(
-            MessageManager.getString("label.variable_colour"));
-    variableColourCB.setSelected(!featureColour.isSimpleColour());
-    men.add(variableColourCB);
-
-    /*
-     * checkbox action listener doubles up as listener to OK
-     * from the variable colour / filters dialog
-     */
-    variableColourCB.addActionListener(new ActionListener()
-    {
-      @Override
-      public void actionPerformed(ActionEvent e)
-      {
-        if (e.getSource() == variableColourCB)
-        {
-                                       // BH 2018 for JavaScript because this is a checkbox
-                                       men.setVisible(true);
-          men.setVisible(false);
-          if (featureColour.isSimpleColour())
-          {
-            /*
-             * toggle simple colour to variable colour - show dialog
-             */
-            FeatureTypeSettings fc = new FeatureTypeSettings(fr, type);
-            fc.addActionListener(this);
-          }
-          else
-          {
-            /*
-             * toggle variable to simple colour - show colour chooser
-             */
-            String title = MessageManager
-                    .formatMessage("label.select_colour_for", type);
-            ColourChooserListener listener = new ColourChooserListener()
-            {
-              @Override
-              public void colourSelected(Color c)
-              {
-                table.setValueAt(new FeatureColour(c), rowSelected,
-                        COLOUR_COLUMN);
-                table.validate();
-                updateFeatureRenderer(
-                        ((FeatureTableModel) table.getModel()).getData(),
-                        false);
-              }
-            };
-            JalviewColourChooser.showColourChooser(FeatureSettings.this,
-                    title, featureColour.getMaxColour(), listener);
-          }
-        }
-        else
-        {
-          if (e.getSource() instanceof FeatureTypeSettings)
-          {
-            /*
-             * update after OK in feature colour dialog; the updated
-             * colour will have already been set in the FeatureRenderer
-             */
-            FeatureColourI fci = fr.getFeatureColours().get(type);
-            table.setValueAt(fci, rowSelected, COLOUR_COLUMN);
-            // BH 2018 setting a table value does not invalidate it.
-            // System.out.println("FeatureSettings is valied" +
-            // table.validate();
-          }
-        }
-      }
-    });
-
-    men.addSeparator();
 
     JMenuItem scr = new JMenuItem(
             MessageManager.getString("label.sort_by_score"));
@@ -1529,7 +1456,7 @@ public class FeatureSettings extends JPanel
     String text = MessageManager.formatMessage("label.show_linked_features",
             nucleotide
                     ? MessageManager.getString("label.protein")
-                            .toLowerCase()
+                            .toLowerCase(Locale.ROOT)
                     : "CDS");
     showComplement = new JCheckBox(text);
     showComplement.addActionListener(new ActionListener()