JAL-3010 relocated ontology search method to OntologyBase

[jalview.git] / src / jalview / gui / FeatureTypeSettings.java

diff --git a/src/jalview/gui/FeatureTypeSettings.java b/src/jalview/gui/FeatureTypeSettings.java
index e7efea9..b5eb9be 100644 (file)
--- a/src/jalview/gui/FeatureTypeSettings.java
+++ b/src/jalview/gui/FeatureTypeSettings.java
@@ -251,8 +251,9 @@ public class FeatureTypeSettings extends JalviewDialog
     this.featureType = theType;
     ap = fr.ap;
 
-    relatedSoTerms = findSequenceOntologyGroupings(this.featureType,
-            fr.getRenderOrder());
+    SequenceOntologyI so = SequenceOntologyFactory.getInstance();
+    relatedSoTerms = so.findSequenceOntologyGroupings(
+            this.featureType, fr.getRenderOrder());
 
     /*
      * save original colours and filters for this feature type,