refactor to allow distinct StructureSelectionManager instances for

[jalview.git] / src / jalview / gui / Jalview2XML.java

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
old mode 100755 (executable)
new mode 100644 (file)
index 5a13723..e639844
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -48,7 +48,7 @@ import jalview.util.jarInputStreamProvider;
  * will be :)
  * 
  * @author $author$
- * @version $Revision$
+ * @version $Revision: 1.134 $
  */
 public class Jalview2XML
 {
@@ -2831,8 +2831,7 @@ public class Jalview2XML
               String pdbFile = (String) filedat[0];
               SequenceI[] seq = (SequenceI[]) ((Vector<SequenceI>) filedat[2])
                       .toArray(new SequenceI[0]);
-              StructureSelectionManager.getStructureSelectionManager()
-                      .setMapping(seq, null, pdbFile,
+              ((AppJmol) comp).jmb.ssm.setMapping(seq, null, pdbFile,
                               jalview.io.AppletFormatAdapter.FILE);
               ((AppJmol) comp).jmb.addSequenceForStructFile(pdbFile, seq);
             }