}
PairwiseAlignPanel pap = new PairwiseAlignPanel(av, selGroup, true,
- GAP_OPEN_COST, GAP_EXTEND_COST, false);
+ GAP_OPEN_COST, GAP_EXTEND_COST, false, null);
System.out.println(pap != null);
setPairwiseAlignPanel(pap);
getPasimapModel().calculate(pap);