import jalview.api.AlignmentViewPanel;
import jalview.api.FeatureRenderer;
-import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.datamodel.StructureViewerModel;
initPymol();
} catch (Exception ex)
{
- Cache.error("Couldn't open PyMOL viewer!", ex);
+ Console.error("Couldn't open PyMOL viewer!", ex);
}
}
int num = -1;
binding.stashFoundChains(pdb, pe.getFile());
} catch (Exception ex)
{
- Cache.error(
+ Console.error(
"Couldn't open " + pe.getFile() + " in Chimera viewer!",
ex);
} finally
boolean opened = binding.openSession(pymolSessionFile);
if (!opened)
{
- Cache.error(
+ Console.error(
"An error occurred opening PyMOL session file "
+ pymolSessionFile);
}