}
else
{
- cs = ColourSchemeProperty.getColour(sg, ColourSchemeProperty.getColourName(av
- .getGlobalColourScheme()));
+ cs = ColourSchemeProperty.getColour(sg, ColourSchemeProperty
+ .getColourName(av.getGlobalColourScheme()));
}
// cs is null if shading is an annotationColourGradient
- if (cs!=null)
+ if (cs != null)
{
cs.setThreshold(av.getGlobalColourScheme().getThreshold(),
av.getIgnoreGapsConsensus());
}
}
- sg.cs=cs;
-// sg.recalcConservation();
+ sg.cs = cs;
+ // sg.recalcConservation();
sg.setName("JTreeGroup:" + sg.hashCode());
sg.setIdColour(col);
for (int a = 0; a < aps.length; a++)
for (int a = 0; a < aps.length; a++)
{
aps[a].updateAnnotation();
- // TODO: JAL-868 - need to ensure view colour change message is broadcast to any Jmols listening in
+ // TODO: JAL-868 - need to ensure view colour change message is broadcast
+ // to any Jmols listening in
}
}