JAL-2326 updated references of JOptionPane to JvOptionPane

[jalview.git] / src / jalview / gui / WsJobParameters.java

diff --git a/src/jalview/gui/WsJobParameters.java b/src/jalview/gui/WsJobParameters.java
index 23645df..17c0760 100644 (file)
--- a/src/jalview/gui/WsJobParameters.java
+++ b/src/jalview/gui/WsJobParameters.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -61,7 +61,6 @@ import javax.swing.JComboBox;
 import javax.swing.JDialog;
 import javax.swing.JFrame;
 import javax.swing.JLabel;
-import javax.swing.JOptionPane;
 import javax.swing.JPanel;
 import javax.swing.JScrollPane;
 import javax.swing.JSplitPane;
@@ -218,7 +217,8 @@ public class WsJobParameters extends JPanel implements ItemListener,
 
     frame = new JDialog(Desktop.instance, true);
 
-    frame.setTitle(MessageManager.formatMessage("label.edit_params_for", new String[]{service.getActionText()}));
+    frame.setTitle(MessageManager.formatMessage("label.edit_params_for",
+            new String[] { service.getActionText() }));
     Rectangle deskr = Desktop.instance.getBounds();
     Dimension pref = this.getPreferredSize();
     frame.setBounds(new Rectangle(
@@ -232,6 +232,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
     frame.validate();
     javax.swing.SwingUtilities.invokeLater(new Runnable()
     {
+      @Override
       public void run()
       {
         // jobPanel.setDividerLocation(0.25);
@@ -271,6 +272,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             new ActionListener()
             {
 
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 update_actionPerformed(e);
@@ -282,6 +284,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             new ActionListener()
             {
 
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 delete_actionPerformed(e);
@@ -293,6 +296,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             new ActionListener()
             {
 
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 create_actionPerformed(e);
@@ -304,6 +308,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             new ActionListener()
             {
 
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 revert_actionPerformed(e);
@@ -314,6 +319,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             MessageManager.getString("label.start_job_current_settings"),
             new ActionListener()
             {
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 startjob_actionPerformed(e);
@@ -324,6 +330,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
             MessageManager.getString("label.cancel_job_close_dialog"),
             new ActionListener()
             {
+              @Override
               public void actionPerformed(ActionEvent e)
               {
                 canceljob_actionPerformed(e);
@@ -342,7 +349,6 @@ public class WsJobParameters extends JPanel implements ItemListener,
     setDescr.setToolTipText(MessageManager
             .getString("label.edit_notes_parameter_set"));
     JScrollPane setDescrView = new JScrollPane();
-    // setDescrView.setPreferredSize(new Dimension(350, 200));
     setDescrView.getViewport().setView(setDescr);
     setName.setEditable(true);
     setName.addItemListener(this);
@@ -426,6 +432,11 @@ public class WsJobParameters extends JPanel implements ItemListener,
     JPanel dialogpanel = new JPanel();
     dialogpanel.add(startjob);
     dialogpanel.add(canceljob);
+    // JAL-1580: setMaximumSize() doesn't work, so just size for the worst case:
+    // check for null is for JUnit usage
+    final int windowHeight = Desktop.instance == null ? 540
+            : Desktop.instance.getHeight();
+    setPreferredSize(new Dimension(540, windowHeight));
     add(dialogpanel, BorderLayout.SOUTH);
     validate();
   }
@@ -433,7 +444,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
   protected void revert_actionPerformed(ActionEvent e)
   {
     reInitDialog(lastParmSet);
-
+    updateWebServiceMenus();
   }
 
   protected void update_actionPerformed(ActionEvent e)
@@ -462,6 +473,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
       _deleteUserPreset(lastParmSet);
     }
     reInitDialog(null); // service default
+    updateWebServiceMenus();
   }
 
   protected void create_actionPerformed(ActionEvent e)
@@ -472,7 +484,9 @@ public class WsJobParameters extends JPanel implements ItemListener,
       _storeCurrentPreset(curname);
       lastParmSet = curname;
       isUserPreset = true;
+      reInitDialog(curname);
       initArgSetModified();
+      updateWebServiceMenus();
     }
     else
     {
@@ -527,7 +541,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
     Hashtable exnames = new Hashtable();
     for (int i = 0, iSize = setName.getItemCount(); i < iSize; i++)
     {
-      exnames.put((String) setName.getItemAt(i), setName.getItemAt(i));
+      exnames.put(setName.getItemAt(i), setName.getItemAt(i));
     }
     servicePresets = new Hashtable();
     // Add the default entry - if not present already.
@@ -728,6 +742,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
     validate();
   }
 
+  @Override
   public void argSetModified(Object modifiedElement, boolean b)
   {
     if (settingDialog)
@@ -819,6 +834,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
     settingDialog = stn;
   }
 
+  @Override
   public void refreshParamLayout()
   {
     // optsAndparams.setPreferredSize(null);
@@ -950,7 +966,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
     {
       Vector<String> services = new Vector<String>();
       services.addElement(args[p++]);
-      Jws2Discoverer.setServiceUrls(services);
+      Jws2Discoverer.getDiscoverer().setServiceUrls(services);
     }
     try
     {
@@ -1091,7 +1107,9 @@ public class WsJobParameters extends JPanel implements ItemListener,
             }
             WsJobParameters pgui = new WsJobParameters(lastserv,
                     new JabaPreset(lastserv, pr));
-            JFrame jf = new JFrame(MessageManager.formatMessage("label.ws_parameters_for", new String[]{lastserv.getActionText()}));
+            JFrame jf = new JFrame(MessageManager.formatMessage(
+                    "label.ws_parameters_for",
+                    new String[] { lastserv.getActionText() }));
             JPanel cont = new JPanel(new BorderLayout());
             pgui.validate();
             cont.setPreferredSize(pgui.getPreferredSize());
@@ -1103,40 +1121,47 @@ public class WsJobParameters extends JPanel implements ItemListener,
             jf.addWindowListener(new WindowListener()
             {
 
+              @Override
               public void windowActivated(WindowEvent e)
               {
                 // TODO Auto-generated method stub
 
               }
 
+              @Override
               public void windowClosed(WindowEvent e)
               {
               }
 
+              @Override
               public void windowClosing(WindowEvent e)
               {
                 thr.interrupt();
 
               }
 
+              @Override
               public void windowDeactivated(WindowEvent e)
               {
                 // TODO Auto-generated method stub
 
               }
 
+              @Override
               public void windowDeiconified(WindowEvent e)
               {
                 // TODO Auto-generated method stub
 
               }
 
+              @Override
               public void windowIconified(WindowEvent e)
               {
                 // TODO Auto-generated method stub
 
               }
 
+              @Override
               public void windowOpened(WindowEvent e)
               {
                 // TODO Auto-generated method stub
@@ -1290,11 +1315,23 @@ public class WsJobParameters extends JPanel implements ItemListener,
     SetNamePanel.validate();
     validate();
     settingDialog = false;
+  }
 
+  /**
+   * Rebuild the AlignFrame web service menus (after add/delete of a preset
+   * option).
+   */
+  protected void updateWebServiceMenus()
+  {
+    for (AlignFrame alignFrame : Desktop.getAlignFrames())
+    {
+      alignFrame.BuildWebServiceMenu();
+    }
   }
 
   String curSetName = null;
 
+  @Override
   public void itemStateChanged(ItemEvent e)
   {
     if (e.getSource() == setName && e.getStateChange() == e.SELECTED)
@@ -1313,6 +1350,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
       }
       javax.swing.SwingUtilities.invokeLater(new Runnable()
       {
+        @Override
         public void run()
         {
           doPreferenceComboStateChange(setname);
@@ -1334,14 +1372,14 @@ public class WsJobParameters extends JPanel implements ItemListener,
       }
       settingDialog = true;
       System.out.println("Prompting to save " + lsetname);
-      if (javax.swing.JOptionPane
+      if (JvOptionPane
               .showConfirmDialog(
                       this,
                       "Parameter set '"
                               + lsetname
                               + "' is modifed, and your changes will be lost.\nReally change preset ?",
                       "Warning: Unsaved Changes",
-                      javax.swing.JOptionPane.OK_CANCEL_OPTION) != JOptionPane.OK_OPTION)
+                      JvOptionPane.OK_CANCEL_OPTION) != JvOptionPane.OK_OPTION)
       {
         // revert the combobox to the current item
         settingDialog = true;
@@ -1393,6 +1431,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
    */
   String lastDescrText = null;
 
+  @Override
   public void actionPerformed(ActionEvent e)
   {
     if (e.getSource() instanceof Component)
@@ -1401,7 +1440,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
       if (src.getParent() == setName)
       {
         // rename any existing records we know about for this set.
-        String newname = (String) e.getActionCommand().trim();
+        String newname = e.getActionCommand().trim();
         String msg = null;
         if (isServicePreset(newname))
         {
@@ -1413,11 +1452,13 @@ public class WsJobParameters extends JPanel implements ItemListener,
           settingDialog = false;
           javax.swing.SwingUtilities.invokeLater(new Runnable()
           {
+            @Override
             public void run()
             {
-              JOptionPane.showMessageDialog(ourframe,
-                      MessageManager.getString("label.invalid_name_preset_exists"),
-                      MessageManager.getString("label.invalid_name"), JOptionPane.WARNING_MESSAGE);
+              JvOptionPane.showMessageDialog(ourframe, MessageManager
+                      .getString("label.invalid_name_preset_exists"),
+                      MessageManager.getString("label.invalid_name"),
+                      JvOptionPane.WARNING_MESSAGE);
             }
           });
 
@@ -1453,16 +1494,19 @@ public class WsJobParameters extends JPanel implements ItemListener,
     }
   }
 
+  @Override
   public void insertUpdate(DocumentEvent e)
   {
     checkDescrModified();
   }
 
+  @Override
   public void removeUpdate(DocumentEvent e)
   {
     checkDescrModified();
   }
 
+  @Override
   public void changedUpdate(DocumentEvent e)
   {
     checkDescrModified();