\r
if (format.equalsIgnoreCase("Jalview"))\r
{\r
- af = Jalview2XML.LoadJalviewAlign(file);\r
+ af = new Jalview2XML().LoadJalviewAlign(file);\r
}\r
else\r
{\r
+ String errorMessage = AppletFormatAdapter.SUPPORTED_FORMATS;\r
+\r
if (FormatAdapter.formats.contains(format))\r
{\r
- sequences = new FormatAdapter().readFile(file, protocol, format);\r
+ try{\r
+ sequences = new FormatAdapter().readFile(file, protocol, format);\r
+ }catch(java.io.IOException ex)\r
+ {\r
+ errorMessage = ex.getMessage();\r
+ }\r
}\r
\r
if ( (sequences != null) && (sequences.length > 0))\r
else\r
{\r
JOptionPane.showInternalMessageDialog(Desktop.desktop,\r
- "Couldn't open file.\n" +\r
- "Formats currently supported are\n" +\r
- "Fasta, MSF, Clustal, BLC, PIR, MSP, and PFAM" // JBPNote - message should be generated through FormatAdapter!\r
- , "Error loading file",\r
+ "Couldn't load file "+file+"\n"\r
+ +errorMessage,\r
+ "Error loading file",\r
JOptionPane.WARNING_MESSAGE);\r
}\r
}\r