/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
package jalview.io;
import jalview.api.ComplexAlignFile;
+import jalview.api.FeatureSettingsModelI;
import jalview.api.FeaturesDisplayedI;
import jalview.api.FeaturesSourceI;
import jalview.bin.Jalview;
}
}
+ FeatureSettingsModelI proxyColourScheme = source
+ .getFeatureColourScheme();
if (viewport != null)
{
+ if (proxyColourScheme != null)
+ {
+ viewport.applyFeaturesStyle(proxyColourScheme);
+ }
// append to existing alignment
viewport.addAlignment(al, title);
}
{
alignFrame.setFileName(file, format);
}
-
+ if (proxyColourScheme != null)
+ {
+ alignFrame.getViewport()
+ .applyFeaturesStyle(proxyColourScheme);
+ }
alignFrame.statusBar.setText(MessageManager.formatMessage(
"label.successfully_loaded_file",
new String[] { title }));