JAL-2344 separated AlignmentFileI into AlignmentFileReaderI,

[jalview.git] / src / jalview / io / FormatAdapter.java

diff --git a/src/jalview/io/FormatAdapter.java b/src/jalview/io/FormatAdapter.java
index ce584f2..d9dd79d 100755 (executable)
--- a/src/jalview/io/FormatAdapter.java
+++ b/src/jalview/io/FormatAdapter.java
@@ -258,8 +258,8 @@ public class FormatAdapter extends AppletFormatAdapter
             selectedOnly);
   }
 
-  public AlignmentI readFromFile(AlignmentFileI source, FileFormatI format)
-          throws IOException
+  public AlignmentI readFromFile(AlignmentFileReaderI source,
+          FileFormatI format) throws IOException
   {
     FileParse fp = new FileParse(source.getInFile(),
             source.getDataSourceType());