{
private ColourSchemeI colourScheme;
- // private static boolean seqFeaturesEnabled;
-
private String jalviewVersion;
private String webStartLaunchServletUrl;
private FeaturesDisplayedI displayedFeatures;
- // private AlignViewportI viewport;
-
private FeatureRenderer fr;
private JSONExportSettings jsonExportSettings;
setDisplayedFeatures(getViewport().getFeaturesDisplayed());
showSeqFeatures = getViewport().isShowSequenceFeatures();
fr = getViewport().getFeatureRenderer();
- // setSeqFeaturesEnabled(viewport.isShowSequenceFeatures());
}
int count = 0;
Boolean showFeatures = Boolean.valueOf(jvSettingsJsonObj.get(
"showSeqFeatures").toString());
setColourScheme(getJalviewColorScheme(jsColourScheme));
- // JSONFile.setSeqFeaturesEnabled(showFeatures);
setShowSeqFeatures(showFeatures);
}
return jalviewColor;
}
- public void LoadAlignmentFeatures(AlignFrame af)
+ public void applySettingsToAlignFrame(AlignFrame af)
{
af.setShowSeqFeatures(isShowSeqFeatures());
af.changeColour(getColourScheme());