JAL-1988 JAL-3772 Non-blocking modal dialogs for unsaved changes and saving files...
[jalview.git] / src / jalview / io / JalviewFileChooser.java
index cf72ffb..dba7ad1 100755 (executable)
 //////////////////////////////////////////////////////////////////
 package jalview.io;
 
-import jalview.bin.Cache;
-import jalview.gui.JvOptionPane;
-import jalview.util.MessageManager;
-import jalview.util.Platform;
-import jalview.util.dialogrunner.DialogRunnerI;
-import jalview.util.dialogrunner.Response;
-import jalview.util.dialogrunner.RunResponse;
-
 import java.awt.Component;
 import java.awt.Dimension;
 import java.awt.EventQueue;
 import java.awt.HeadlessException;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
 import java.awt.event.MouseAdapter;
 import java.awt.event.MouseEvent;
 import java.beans.PropertyChangeEvent;
 import java.beans.PropertyChangeListener;
 import java.io.File;
 import java.util.ArrayList;
+import java.util.HashMap;
 import java.util.List;
+import java.util.Map;
 import java.util.StringTokenizer;
 import java.util.Vector;
+import java.util.concurrent.Callable;
 
+import javax.swing.BoxLayout;
 import javax.swing.DefaultListCellRenderer;
+import javax.swing.JCheckBox;
 import javax.swing.JFileChooser;
 import javax.swing.JList;
+import javax.swing.JOptionPane;
 import javax.swing.JPanel;
 import javax.swing.JScrollPane;
 import javax.swing.SpringLayout;
+import javax.swing.filechooser.FileFilter;
 import javax.swing.plaf.basic.BasicFileChooserUI;
 
+import jalview.bin.Cache;
+import jalview.gui.JvOptionPane;
+import jalview.util.MessageManager;
+import jalview.util.Platform;
+import jalview.util.dialogrunner.DialogRunnerI;
+
 /**
  * Enhanced file chooser dialog box.
  *
@@ -61,10 +68,22 @@ import javax.swing.plaf.basic.BasicFileChooserUI;
  *
  */
 public class JalviewFileChooser extends JFileChooser
-        implements PropertyChangeListener, DialogRunnerI
+        implements DialogRunnerI, PropertyChangeListener
 {
-  jalview.util.dialogrunner.DialogRunner<JalviewFileChooser> runner = new jalview.util.dialogrunner.DialogRunner<>(
-          this);
+  private static final long serialVersionUID = 1L;
+
+  private Map<Object, Callable> callbacks = new HashMap<>();
+
+  File selectedFile = null;
+
+  /**
+   * backupfilesCheckBox = "Include backup files" checkbox includeBackupfiles =
+   * flag set by checkbox
+   */
+  private JCheckBox backupfilesCheckBox = null;
+
+  protected boolean includeBackupFiles = false;
+
   /**
    * Factory method to return a file chooser that offers readable alignment file
    * formats
@@ -76,6 +95,12 @@ public class JalviewFileChooser extends JFileChooser
   public static JalviewFileChooser forRead(String directory,
           String selected)
   {
+    return JalviewFileChooser.forRead(directory, selected, false);
+  }
+
+  public static JalviewFileChooser forRead(String directory,
+          String selected, boolean allowBackupFiles)
+  {
     List<String> extensions = new ArrayList<>();
     List<String> descs = new ArrayList<>();
     for (FileFormatI format : FileFormats.getInstance().getFormats())
@@ -86,9 +111,11 @@ public class JalviewFileChooser extends JFileChooser
         descs.add(format.getName());
       }
     }
+
     return new JalviewFileChooser(directory,
             extensions.toArray(new String[extensions.size()]),
-            descs.toArray(new String[descs.size()]), selected, true);
+            descs.toArray(new String[descs.size()]), selected, true,
+            allowBackupFiles);
   }
 
   /**
@@ -145,7 +172,13 @@ public class JalviewFileChooser extends JFileChooser
   }
 
   JalviewFileChooser(String dir, String[] extensions, String[] descs,
-          String selected, boolean allFiles)
+          String selected, boolean acceptAny)
+  {
+    this(dir, extensions, descs, selected, acceptAny, false);
+  }
+
+  public JalviewFileChooser(String dir, String[] extensions, String[] descs,
+          String selected, boolean acceptAny, boolean allowBackupFiles)
   {
     super(safePath(dir));
     if (extensions.length == descs.length)
@@ -155,7 +188,7 @@ public class JalviewFileChooser extends JFileChooser
       {
         formats.add(new String[] { extensions[i], descs[i] });
       }
-      init(formats, selected, allFiles);
+      init(formats, selected, acceptAny, allowBackupFiles);
     }
     else
     {
@@ -164,18 +197,6 @@ public class JalviewFileChooser extends JFileChooser
     }
   }
 
-  @Override
-  public void propertyChange(PropertyChangeEvent evt)
-  {
-    // TODO other properties need runners...
-    switch (evt.getPropertyName())
-    {
-    case "SelectedFile": 
-      runner.run(APPROVE_OPTION);
-      break;
-    }
-  }
-
   private static File safePath(String dir)
   {
     if (dir == null)
@@ -191,10 +212,30 @@ public class JalviewFileChooser extends JFileChooser
     return f;
   }
 
-  public void openDialog(Component parent)
+  /**
+   * Overridden for JalviewJS compatibility: only one thread in Javascript, so
+   * we can't wait for user choice in another thread and then perform the
+   * desired action
+   */
+  @Override
+  public int showOpenDialog(Component parent)
   {
-    int value = showOpenDialog(this);
-    runner.run(value);
+    int value = super.showOpenDialog(this);
+
+    if (!Platform.isJS())
+    /**
+     * Java only
+     * 
+     * @j2sIgnore
+     */
+    {
+      /*
+       * code here is not run in JalviewJS, instead
+       * propertyChange() is called for dialog action
+       */
+      handleResponse(value);
+    }
+    return value;
   }
 
   /**
@@ -202,21 +243,31 @@ public class JalviewFileChooser extends JFileChooser
    * @param formats
    *          a list of {extensions, description} for each file format
    * @param selected
-   * @param allFiles
+   * @param acceptAny
    *          if true, 'any format' option is included
    */
-  void init(List<String[]> formats, String selected, boolean allFiles)
+  void init(List<String[]> formats, String selected, boolean acceptAny)
+  {
+    init(formats, selected, acceptAny, false);
+  }
+
+  void init(List<String[]> formats, String selected, boolean acceptAny,
+          boolean allowBackupFiles)
   {
 
     JalviewFileFilter chosen = null;
 
     // SelectAllFilter needs to be set first before adding further
     // file filters to fix bug on Mac OSX
-    setAcceptAllFileFilterUsed(allFiles);
+    setAcceptAllFileFilterUsed(acceptAny);
 
     for (String[] format : formats)
     {
       JalviewFileFilter jvf = new JalviewFileFilter(format[0], format[1]);
+      if (allowBackupFiles)
+      {
+        jvf.setParentJFC(this);
+      }
       addChoosableFileFilter(jvf);
       if ((selected != null) && selected.equalsIgnoreCase(format[1]))
       {
@@ -229,7 +280,65 @@ public class JalviewFileChooser extends JFileChooser
       setFileFilter(chosen);
     }
 
-    setAccessory(new RecentlyOpened());
+    if (allowBackupFiles)
+    {
+      JPanel multi = new JPanel();
+      multi.setLayout(new BoxLayout(multi, BoxLayout.PAGE_AXIS));
+      if (backupfilesCheckBox == null)
+      {
+        try
+        {
+          includeBackupFiles = Boolean.parseBoolean(
+                  Cache.getProperty(BackupFiles.NS + "_FC_INCLUDE"));
+        } catch (Exception e)
+        {
+          includeBackupFiles = false;
+        }
+        backupfilesCheckBox = new JCheckBox(
+                MessageManager.getString("label.include_backup_files"),
+                includeBackupFiles);
+        backupfilesCheckBox.setAlignmentX(Component.CENTER_ALIGNMENT);
+        JalviewFileChooser jfc = this;
+        backupfilesCheckBox.addActionListener(new ActionListener()
+        {
+          @Override
+          public void actionPerformed(ActionEvent e)
+          {
+            includeBackupFiles = backupfilesCheckBox.isSelected();
+            Cache.setProperty(BackupFiles.NS + "_FC_INCLUDE",
+                    String.valueOf(includeBackupFiles));
+
+            FileFilter f = jfc.getFileFilter();
+            // deselect the selected file if it's no longer choosable
+            File selectedFile = jfc.getSelectedFile();
+            if (selectedFile != null && !f.accept(selectedFile))
+            {
+              jfc.setSelectedFile(null);
+            }
+            // fake the OK button changing (to force it to upate)
+            String s = jfc.getApproveButtonText();
+            jfc.firePropertyChange(APPROVE_BUTTON_TEXT_CHANGED_PROPERTY,
+                    null, s);
+            // fake the file filter changing (its behaviour actually has)
+            jfc.firePropertyChange(FILE_FILTER_CHANGED_PROPERTY, null, f);
+
+            jfc.rescanCurrentDirectory();
+            jfc.revalidate();
+            jfc.repaint();
+          }
+        });
+      }
+      multi.add(new RecentlyOpened());
+      multi.add(backupfilesCheckBox);
+      setAccessory(multi);
+    }
+    else
+    {
+      // set includeBackupFiles=false to avoid other file choosers from picking
+      // up backup files (Just In Case)
+      includeBackupFiles = false;
+      setAccessory(new RecentlyOpened());
+    }
   }
 
   @Override
@@ -304,80 +413,98 @@ public class JalviewFileChooser extends JFileChooser
     return null;
   }
 
-  Component saveparent;
-  RunResponse overwriteCheck = new RunResponse(
-          JalviewFileChooser.APPROVE_OPTION)
+  @Override
+  public File getSelectedFile()
+  {
+    File f = super.getSelectedFile();
+    return f == null ? selectedFile : f;
+  }
+
+  @Override
+  public int showSaveDialog(Component parent) throws HeadlessException
+  {
+    this.setAccessory(null);
+    // Java 9,10,11 on OSX - clear selected file so name isn't auto populated
+    this.setSelectedFile(null);
+
+    return super.showSaveDialog(parent);
+  }
+
+  /**
+   * If doing a Save, and an existing file is chosen or entered, prompt for
+   * confirmation of overwrite. Proceed if Yes, else leave the file chooser
+   * open.
+   * 
+   * @see https://stackoverflow.com/questions/8581215/jfilechooser-and-checking-for-overwrite
+   */
+  @Override
+  public void approveSelection()
   {
-    @Override
-    public void run()
+    if (getDialogType() != SAVE_DIALOG)
     {
-      // JBP Note - this code was executed regardless of 'SAVE' being pressed
-      // need to see if there were side effects
-      if (getFileFilter() instanceof JalviewFileFilter)
-      {
-        JalviewFileFilter jvf = (JalviewFileFilter) getFileFilter();
+      super.approveSelection();
+      return;
+    }
 
-        if (!jvf.accept(getSelectedFile()))
-        {
-          String withExtension = getSelectedFile() + "."
-                  + jvf.getAcceptableExtension();
-          setSelectedFile(new File(withExtension));
-        }
-      }
-      // All good, so we continue to save
-      returned = new Response(JalviewFileChooser.APPROVE_OPTION);
+    selectedFile = getSelectedFile();
 
-      // TODO: ENSURE THAT FILES SAVED WITH A ':' IN THE NAME ARE REFUSED AND THE
-      // USER PROMPTED FOR A NEW FILENAME
-      /**
-       * @j2sNative
-       */
+    if (selectedFile == null)
+    {
+      // Workaround for Java 9,10 on OSX - no selected file, but there is a
+      // filename typed in
+      try
       {
-        if (getSelectedFile().exists())
+        String filename = ((BasicFileChooserUI) getUI()).getFileName();
+        if (filename != null && filename.length() > 0)
         {
-          // TODO JAL-3048 - may not need to raise this for browser saves
-
-          // yes/no cancel
-          int confirm = JvOptionPane.showConfirmDialog(saveparent,
-                  MessageManager.getString("label.overwrite_existing_file"),
-                  MessageManager.getString("label.file_already_exists"),
-                  JvOptionPane.YES_NO_OPTION);
-
-          if (confirm != JvOptionPane.YES_OPTION)
-          {
-            returned = new Response(JalviewFileChooser.CANCEL_OPTION);
-          }
+          selectedFile = new File(getCurrentDirectory(), filename);
         }
+      } catch (Throwable x)
+      {
+        System.err.println(
+                "Unexpected exception when trying to get filename.");
+        x.printStackTrace();
       }
-    };
-  };
-
-  @Override
-  public int showSaveDialog(Component parent) throws HeadlessException
-  {
-    this.setAccessory(null);
+      // TODO: ENSURE THAT FILES SAVED WITH A ':' IN THE NAME ARE REFUSED AND
+      // THE
+      // USER PROMPTED FOR A NEW FILENAME
+    }
 
-    /*
-     * Save dialog is opened until user picks a file format 
-     */
-    if (!runner.isRegistered(overwriteCheck))
+    if (selectedFile == null)
     {
-      // first call for this instance
-      runner.firstResponse(overwriteCheck);
+      return;
     }
-    else
+
+    if (getFileFilter() instanceof JalviewFileFilter)
     {
-      // reset response flags
-      runner.resetResponses();
+      JalviewFileFilter jvf = (JalviewFileFilter) getFileFilter();
+
+      if (!jvf.accept(selectedFile))
+      {
+        String withExtension = getSelectedFile().getName() + "."
+                + jvf.getAcceptableExtension();
+        selectedFile = (new File(getCurrentDirectory(), withExtension));
+        setSelectedFile(selectedFile);
+      }
     }
 
-    setDialogType(SAVE_DIALOG);
-    saveparent = parent;
+    if (selectedFile.exists())
+    {
+      int confirm = Cache.getDefault("CONFIRM_OVERWRITE_FILE", true)
+              ? JvOptionPane.showConfirmDialog(this,
+                      MessageManager
+                              .getString("label.overwrite_existing_file"),
+                      MessageManager.getString("label.file_already_exists"),
+                      JvOptionPane.YES_NO_OPTION)
+              : JOptionPane.YES_OPTION;
+
+      if (confirm != JvOptionPane.YES_OPTION)
+      {
+        return;
+      }
+    }
 
-    int value = showDialog(parent, MessageManager.getString("action.save"));
-    
-    runner.run(value);
-    return value;
+    super.approveSelection();
   }
 
   void recentListSelectionChanged(Object selection)
@@ -402,14 +529,16 @@ public class JalviewFileChooser extends JFileChooser
 
   class RecentlyOpened extends JPanel
   {
-    JList list;
+    private static final long serialVersionUID = 1L;
 
-    public RecentlyOpened()
-    {
+    JList<String> list;
 
-      String historyItems = jalview.bin.Cache.getProperty("RECENT_FILE");
+    RecentlyOpened()
+    {
+      setPreferredSize(new Dimension(300, 100));
+      String historyItems = Cache.getProperty("RECENT_FILE");
       StringTokenizer st;
-      Vector recent = new Vector();
+      Vector<String> recent = new Vector<>();
 
       if (historyItems != null)
       {
@@ -417,11 +546,11 @@ public class JalviewFileChooser extends JFileChooser
 
         while (st.hasMoreTokens())
         {
-          recent.addElement(st.nextElement());
+          recent.addElement(st.nextToken());
         }
       }
 
-      list = new JList(recent);
+      list = new JList<>(recent);
 
       DefaultListCellRenderer dlcr = new DefaultListCellRenderer();
       dlcr.setHorizontalAlignment(DefaultListCellRenderer.RIGHT);
@@ -447,13 +576,13 @@ public class JalviewFileChooser extends JFileChooser
       layout.putConstraint(SpringLayout.NORTH, scroller, 5,
               SpringLayout.NORTH, this);
 
-      if (new Platform().isAMac())
+      if (Platform.isAMacAndNotJS())
       {
         scroller.setPreferredSize(new Dimension(500, 100));
       }
       else
       {
-        scroller.setPreferredSize(new Dimension(130, 200));
+        scroller.setPreferredSize(new Dimension(530, 200));
       }
 
       this.add(scroller);
@@ -472,10 +601,73 @@ public class JalviewFileChooser extends JFileChooser
 
   }
 
+  /*
   @Override
-  public JalviewFileChooser response(RunResponse action)
+  public JalviewFileChooser setResponseHandler(Object response,
+          Runnable action)
   {
-    return runner.response(action);
+    callbacks.put(response, new Callable<Void>()
+    {
+      @Override
+      public Void call()
+      {
+        action.run();
+        return null;
+      }
+    });
+    return this;
+  }
+  */
+
+  @Override
+  public DialogRunnerI setResponseHandler(Object response, Callable action)
+  {
+    callbacks.put(response, action);
+    return this;
+  }
+
+  @Override
+  public void handleResponse(Object response)
+  {
+    /*
+    * this test is for NaN in Chrome
+    */
+    if (response != null && !response.equals(response))
+    {
+      return;
+    }
+    Callable action = callbacks.get(response);
+    if (action != null)
+    {
+      try
+      {
+        action.call();
+      } catch (Exception e)
+      {
+        e.printStackTrace();
+      }
+    }
   }
 
+  /**
+   * JalviewJS signals file selection by a property change event for property
+   * "SelectedFile". This methods responds to that by running the response
+   * action for 'OK' in the dialog.
+   * 
+   * @param evt
+   */
+  @Override
+  public void propertyChange(PropertyChangeEvent evt)
+  {
+    // TODO other properties need runners...
+    switch (evt.getPropertyName())
+    {
+    /*
+     * property name here matches that used in JFileChooser.js
+     */
+    case "SelectedFile":
+      handleResponse(APPROVE_OPTION);
+      break;
+    }
+  }
 }