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Sequence is char []
[jalview.git] / src / jalview / io / PIRFile.java
diff --git a/src/jalview/io/PIRFile.java b/src/jalview/io/PIRFile.java
index fa9a28b..8b05171 100755 (executable)
--- a/src/jalview/io/PIRFile.java
+++ b/src/jalview/io/PIRFile.java
@@ -114,7 +114,7 @@ public class PIRFile
 \r
     while ( (i < s.length) && (s[i] != null))\r
     {\r
-      String seq = s[i].getSequence();\r
+      String seq = s[i].getSequenceAsString();\r
       seq = seq + "*";\r
 \r
 \r