Merge branch 'releases/Release_2_11_3_Branch'

[jalview.git] / src / jalview / io / RnamlFile.java

diff --git a/src/jalview/io/RnamlFile.java b/src/jalview/io/RnamlFile.java
index 3041a23..aa2ab4b 100644 (file)
--- a/src/jalview/io/RnamlFile.java
+++ b/src/jalview/io/RnamlFile.java
@@ -160,7 +160,7 @@ public class RnamlFile extends AlignFile
         }
       }
       sqs[i] = new Sequence(id, seq, begin, end);
-      if (seq.length()!=(end-begin+1))
+      if (seq.length() != (end - begin + 1))
       {
         sqs[i].setEnd(sqs[i].findPosition(sqs[i].getLength()));
       }
@@ -212,8 +212,8 @@ public class RnamlFile extends AlignFile
   // public static void main(String[] args) {
   // Pattern p= Pattern.compile("(.+)[.][^.]+");
   // Matcher m = p.matcher("toto.xml.zip");
-  // System.out.println(m.matches());
-  // System.out.println(m.group(1));
+  // jalview.bin.Console.outPrintln(m.matches());
+  // jalview.bin.Console.outPrintln(m.group(1));
   // }
   /**
    * make a friendly ID string.