/*
* selected commonly used values for quick reference
*/
+ // SO:0000104
public static final String POLYPEPTIDE = "polypeptide";
+ // SO:0000349
public static final String PROTEIN_MATCH = "protein_match";
+ // SO:0000347
public static final String NUCLEOTIDE_MATCH = "nucleotide_match";
// SO:0000316
// SO:0000673
public static final String TRANSCRIPT = "transcript";
+ // SO:0001621 isA sequence_variant but used in Ensembl as a transcript
+ public static final String NMD_TRANSCRIPT_VARIANT = "NMD_transcript_variant";
+
// SO:0000704
public static final String GENE = "gene";