*/
package jalview.io.packed;
+import jalview.analysis.SeqsetUtils.SequenceInfo;
import jalview.analysis.TreeModel;
import jalview.api.FeatureColourI;
import jalview.datamodel.AlignmentI;
/**
* @return the seqDetails
*/
- public Hashtable getSeqDetails()
+ public Map<String, SequenceInfo> getSeqDetails()
{
return seqDetails;
}
/**
* original identity of each sequence in results
*/
- Hashtable seqDetails;
+ Map<String, SequenceInfo> seqDetails;
public boolean relaxedIdMatching = false;
* @param parentAlignment
*/
public JalviewDataset(AlignmentI aldataset,
- Map<String, FeatureColourI> fc, Hashtable seqDets)
+ Map<String, FeatureColourI> fc, Map<String, SequenceInfo> seqDets)
{
// TODO not used - remove?
this(aldataset, fc, seqDets, null);
* with.
*/
public JalviewDataset(AlignmentI aldataset,
- Map<String, FeatureColourI> fc, Hashtable seqDets,
+ Map<String, FeatureColourI> fc, Map<String, SequenceInfo> seqDets,
AlignmentI parentAlignment)
{
this();