JAL-1260 source formatting according to utils/eclipse/JalviewCodeStyle.xml

[jalview.git] / src / jalview / io / xdb / genbank / GenBankSequence.java

diff --git a/src/jalview/io/xdb/genbank/GenBankSequence.java b/src/jalview/io/xdb/genbank/GenBankSequence.java
index 279601c..6e0797c 100644 (file)
--- a/src/jalview/io/xdb/genbank/GenBankSequence.java
+++ b/src/jalview/io/xdb/genbank/GenBankSequence.java
@@ -1,57 +1,65 @@
 package jalview.io.xdb.genbank;
 
 import java.util.Vector;
+
 /**
- * A line like the following:
- *   1 aatgaaggtt catttttcat tctcacaaac taatgaaacc ctgcttatct taaaccaacc
- * will be mapped as:
- *     id: 1
- *  sequences: {"aatgaaggtt", "catttttcat", "tctcacaaac", "taatgaaacc", "ctgcttatct", "taaaccaacc"}
- *  Each sequence has 8 nucleotides long
+ * A line like the following: 1 aatgaaggtt catttttcat tctcacaaac taatgaaacc
+ * ctgcttatct taaaccaacc will be mapped as: id: 1 sequences: {"aatgaaggtt",
+ * "catttttcat", "tctcacaaac", "taatgaaacc", "ctgcttatct", "taaaccaacc"} Each
+ * sequence has 8 nucleotides long
+ * 
  * @author darolmar
- *
+ * 
  */
-public class GenBankSequence {
-       //Initial position
-       private int id;
-       //Sequences in that line
-       private Vector<String> sequences;
-
-       public GenBankSequence() {
-               super();
-               sequences = new Vector<String>();
-       }
-
-       public int getId() {
-               return id;
-       }
-
-       public void setId(int id) {
-               this.id = id;
-       }
-
-       public Vector<String> getSequences() {
-               return sequences;
-       }
-
-       public void setSequences(Vector<String> sequences) {
-               this.sequences = sequences;
-       }
-       
-       public String getSequencesAsString(){
-               StringBuffer sb = new StringBuffer();
-               for (String seq:sequences)                      
-                       sb.append(seq).append(" ");                             
-               return sb.toString();           
-       }
-       
-       public String toString(){
-               StringBuffer sb = new StringBuffer()
-                       .append("        ").append(this.id);
-               for (String seq:sequences)                      
-                       sb.append(" ").append(seq);
-               sb.append("\n");                                
-               return sb.toString();
-       }
-       
+public class GenBankSequence
+{
+  // Initial position
+  private int id;
+
+  // Sequences in that line
+  private Vector<String> sequences;
+
+  public GenBankSequence()
+  {
+    super();
+    sequences = new Vector<String>();
+  }
+
+  public int getId()
+  {
+    return id;
+  }
+
+  public void setId(int id)
+  {
+    this.id = id;
+  }
+
+  public Vector<String> getSequences()
+  {
+    return sequences;
+  }
+
+  public void setSequences(Vector<String> sequences)
+  {
+    this.sequences = sequences;
+  }
+
+  public String getSequencesAsString()
+  {
+    StringBuffer sb = new StringBuffer();
+    for (String seq : sequences)
+      sb.append(seq).append(" ");
+    return sb.toString();
+  }
+
+  public String toString()
+  {
+    StringBuffer sb = new StringBuffer().append("        ").append(this.id);
+    for (String seq : sequences)
+      sb.append(" ").append(seq);
+    sb.append("\n");
+    return sb.toString();
+  }
+
 }