add applytoallgroups colouring option

[jalview.git] / src / jalview / jbgui / GAlignFrame.java

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 11d1ff3..093c233 100755 (executable)
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -89,6 +89,7 @@ public class GAlignFrame extends JInternalFrame
   JMenu jMenu1 = new JMenu();\r
   JMenuItem pasteNew = new JMenuItem();\r
   JMenuItem pasteThis = new JMenuItem();\r
+  protected JCheckBoxMenuItem applyToAllGroups = new JCheckBoxMenuItem();\r
   public GAlignFrame()\r
   {\r
 \r
@@ -670,6 +671,15 @@ public class GAlignFrame extends JInternalFrame
         pasteThis_actionPerformed(e);\r
       }\r
     });\r
+    applyToAllGroups.setText("Apply colour to all groups");\r
+    applyToAllGroups.setState(true);\r
+    applyToAllGroups.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        applyToAllGroups_actionPerformed(e);\r
+      }\r
+    });\r
     alignFrameMenuBar.add(fileMenu);\r
     alignFrameMenuBar.add(editMenu);\r
     alignFrameMenuBar.add(searchMenu);\r
@@ -717,6 +727,7 @@ public class GAlignFrame extends JInternalFrame
     viewMenu.add(consensusGraphMenuItem);\r
     viewMenu.add(overviewMenuItem);\r
     viewMenu.add(sequenceFeatures);\r
+    colourMenu.add(applyToAllGroups);\r
     colourMenu.add(noColourmenuItem);\r
     colourMenu.add(clustalColour);\r
     colourMenu.add(zappoColour);\r
@@ -1091,6 +1102,11 @@ public class GAlignFrame extends JInternalFrame
 \r
   }\r
 \r
+  protected void applyToAllGroups_actionPerformed(ActionEvent e)\r
+  {\r
+\r
+  }\r
+\r
 \r
 \r
 }\r