+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.jbgui;
-import javax.swing.*;
-import java.awt.*;
-import java.awt.event.*;
+import jalview.datamodel.AlignmentI;
+import jalview.io.DataSourceType;
+import jalview.io.FileFormat;
+import jalview.io.FormatAdapter;
+import jalview.io.cache.JvCacheableInputBox;
+import jalview.util.MessageManager;
+import java.awt.BorderLayout;
+import java.awt.Dimension;
+import java.awt.Font;
+import java.awt.GridLayout;
+import java.awt.Insets;
+import java.awt.event.ActionEvent;
+import java.awt.event.KeyEvent;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBox;
+import javax.swing.JLabel;
+import javax.swing.JPanel;
+import javax.swing.SwingConstants;
+import javax.swing.SwingUtilities;
+import javax.swing.event.CaretEvent;
+import javax.swing.event.CaretListener;
+import javax.swing.text.JTextComponent;
public class GFinder extends JPanel
{
- JLabel jLabel1 = new JLabel();
- protected JTextField textfield = new JTextField();
+ JLabel jLabelFind = new JLabel();
+
protected JButton findAll = new JButton();
+
protected JButton findNext = new JButton();
- protected JButton cancel = new JButton();
- JPanel jPanel1 = new JPanel();
+
+ JPanel actionsPanel = new JPanel();
+
GridLayout gridLayout1 = new GridLayout();
+ protected JButton createFeatures = new JButton();
+
+ protected JvCacheableInputBox<String> searchBox = new JvCacheableInputBox<String>(
+ getCacheKey());
+
+ BorderLayout mainBorderLayout = new BorderLayout();
+
+ JPanel jPanel2 = new JPanel();
+
+ JPanel jPanel3 = new JPanel();
+
+ JPanel jPanel4 = new JPanel();
+
+ BorderLayout borderLayout2 = new BorderLayout();
+
+ JPanel jPanel6 = new JPanel();
+
+ protected JCheckBox caseSensitive = new JCheckBox();
+
+ protected JCheckBox searchDescription = new JCheckBox();
+
+ GridLayout optionsGridLayout = new GridLayout();
+
+ private static final String FINDER_CACHE_KEY = "CACHE.FINDER";
+
public GFinder()
{
try
{
jbInit();
- }
- catch(Exception e)
+ } catch (Exception e)
{
e.printStackTrace();
}
}
+
private void jbInit() throws Exception
{
- jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));
- jLabel1.setText("Find");
- jLabel1.setBounds(new Rectangle(6, 28, 34, 15));
- this.setLayout(null);
- textfield.setFont(new java.awt.Font("Verdana", 0, 12));
- textfield.setText("");
- textfield.setBounds(new Rectangle(41, 24, 133, 21));
- textfield.addKeyListener(new java.awt.event.KeyAdapter()
- {
- public void keyTyped(KeyEvent e)
- {
- textfield_keyTyped(e);
- }
- });
- textfield.addActionListener(new java.awt.event.ActionListener()
- {
- public void actionPerformed(ActionEvent e)
- {
- textfield_actionPerformed(e);
- }
- });
+ jLabelFind.setFont(new java.awt.Font("Verdana", 0, 12));
+ jLabelFind.setText(MessageManager.getString("label.find"));
+ this.setLayout(mainBorderLayout);
findAll.setFont(new java.awt.Font("Verdana", 0, 12));
- findAll.setText("Find all");
+ findAll.setText(MessageManager.getString("action.find_all"));
findAll.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
findAll_actionPerformed(e);
}
});
- findNext.setEnabled(false);
findNext.setFont(new java.awt.Font("Verdana", 0, 12));
- findNext.setText("Find Next");
+ findNext.setText(MessageManager.getString("action.find_next"));
findNext.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
findNext_actionPerformed(e);
}
});
- cancel.setFont(new java.awt.Font("Verdana", 0, 12));
- cancel.setText("Close");
- cancel.addActionListener(new java.awt.event.ActionListener()
+ actionsPanel.setLayout(gridLayout1);
+ gridLayout1.setHgap(0);
+ gridLayout1.setRows(3);
+ gridLayout1.setVgap(2);
+ createFeatures.setEnabled(false);
+ createFeatures.setFont(new java.awt.Font("Verdana", 0, 12));
+ createFeatures.setMargin(new Insets(0, 0, 0, 0));
+ createFeatures.setText(MessageManager.getString("label.new_feature"));
+ createFeatures.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- cancel_actionPerformed(e);
+ createFeatures_actionPerformed();
}
});
- jPanel1.setBounds(new Rectangle(178, 4, 102, 62));
- jPanel1.setLayout(gridLayout1);
- gridLayout1.setHgap(0);
- gridLayout1.setRows(3);
- gridLayout1.setVgap(2);
- this.add(textfield, null);
- this.add(jPanel1, null);
- jPanel1.add(findNext, null);
- jPanel1.add(findAll, null);
- jPanel1.add(cancel, null);
- this.add(jLabel1, null);
+ searchBox.setFont(new java.awt.Font("Verdana", Font.PLAIN, 12));
+ ((JTextComponent) searchBox.getEditor().getEditorComponent())
+ .addCaretListener(new CaretListener()
+ {
+ @Override
+ public void caretUpdate(CaretEvent e)
+ {
+ textfield_caretUpdate(e);
+ }
+ });
+ searchBox.getEditor().getEditorComponent()
+ .addKeyListener(new java.awt.event.KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent e)
+ {
+ textfield_keyPressed(e);
+ }
+ });
+ mainBorderLayout.setHgap(5);
+ mainBorderLayout.setVgap(5);
+ jPanel4.setLayout(borderLayout2);
+ jPanel2.setPreferredSize(new Dimension(10, 1));
+ jPanel3.setPreferredSize(new Dimension(10, 1));
+ caseSensitive.setHorizontalAlignment(SwingConstants.LEFT);
+ caseSensitive.setText(MessageManager.getString("label.match_case"));
+
+ searchDescription
+ .setText(MessageManager.getString("label.include_description"));
+
+ actionsPanel.add(findNext, null);
+ actionsPanel.add(findAll, null);
+ actionsPanel.add(createFeatures, null);
+ this.add(jLabelFind, java.awt.BorderLayout.WEST);
+ this.add(actionsPanel, java.awt.BorderLayout.EAST);
+ this.add(jPanel2, java.awt.BorderLayout.SOUTH);
+ this.add(jPanel3, java.awt.BorderLayout.NORTH);
+ this.add(jPanel4, java.awt.BorderLayout.CENTER);
+ jPanel4.add(searchBox, java.awt.BorderLayout.NORTH);
+
+ JPanel optionsPanel = new JPanel();
+
+ optionsGridLayout.setHgap(0);
+ optionsGridLayout.setRows(2);
+ optionsGridLayout.setVgap(2);
+ optionsPanel.setLayout(optionsGridLayout);
+ optionsPanel.add(caseSensitive, null);
+ optionsPanel.add(searchDescription, null);
+
+ jPanel4.add(optionsPanel, java.awt.BorderLayout.WEST);
}
- protected void findNext_actionPerformed(ActionEvent e)
+ protected void textfield_keyPressed(KeyEvent e)
{
+ if (e.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ if (!searchBox.isPopupVisible())
+ {
+ e.consume();
+ findNext_actionPerformed(null);
+ }
+ }
+ }
+ protected void findNext_actionPerformed(ActionEvent e)
+ {
}
protected void findAll_actionPerformed(ActionEvent e)
{
-
}
- protected void cancel_actionPerformed(ActionEvent e)
+ public void createFeatures_actionPerformed()
{
-
}
- protected void textfield_actionPerformed(ActionEvent e)
+ public void textfield_caretUpdate(CaretEvent e)
{
+ if (searchBox.getUserInput().indexOf(">") > -1)
+ {
+ SwingUtilities.invokeLater(new Runnable()
+ {
+ @Override
+ public void run()
+ {
+ String str = searchBox.getUserInput();
+ AlignmentI al = null;
+ try
+ {
+ al = new FormatAdapter().readFile(str, DataSourceType.PASTE,
+ FileFormat.Fasta);
+ } catch (Exception ex)
+ {
+ }
+ if (al != null && al.getHeight() > 0)
+ {
+ str = jalview.analysis.AlignSeq.extractGaps(
+ jalview.util.Comparison.GapChars,
+ al.getSequenceAt(0).getSequenceAsString());
+ }
+ }
+ });
+ }
}
- void textfield_keyTyped(KeyEvent e)
+ /**
+ * Returns unique key used for storing Finder cache items in the cache data
+ * structure
+ *
+ * @return
+ */
+ public String getCacheKey()
{
- findNext.setEnabled(true);
+ return FINDER_CACHE_KEY;
}
+
}
git://source.jalview.org / jalview.git / blobdiff