JAL-1125 option to switch between Jalview and SeqSpace PCA calculation modes

[jalview.git] / src / jalview / jbgui / GPCAPanel.java

diff --git a/src/jalview/jbgui/GPCAPanel.java b/src/jalview/jbgui/GPCAPanel.java
index c0905a8..15d4b3e 100755 (executable)
--- a/src/jalview/jbgui/GPCAPanel.java
+++ b/src/jalview/jbgui/GPCAPanel.java
@@ -76,6 +76,7 @@ public class GPCAPanel extends JInternalFrame
   protected JMenu calcSettings=new JMenu();
   protected JCheckBoxMenuItem nuclSetting=new JCheckBoxMenuItem();
   protected JCheckBoxMenuItem protSetting=new JCheckBoxMenuItem();
+  protected JCheckBoxMenuItem jvVersionSetting=new JCheckBoxMenuItem();
   
   protected JLabel statusBar = new JLabel();
   protected GridLayout statusPanelLayout = new GridLayout();
@@ -257,7 +258,18 @@ public class GPCAPanel extends JInternalFrame
       {
         protSetting_actionPerfomed(arg0);
       }
-    });calcSettings.add(nuclSetting);
+    });
+    jvVersionSetting.setText("Jalview PCA Calculation");
+    jvVersionSetting.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent arg0)
+      {
+        jvVersionSetting_actionPerfomed(arg0);
+      }
+    });
+    calcSettings.add(jvVersionSetting);
+    calcSettings.add(nuclSetting);
     calcSettings.add(protSetting);
     statusPanel.setLayout(statusPanelLayout);
     statusBar.setFont(new java.awt.Font("Verdana",0,12));
@@ -372,4 +384,10 @@ public class GPCAPanel extends JInternalFrame
   {
 
   }
+
+  protected void jvVersionSetting_actionPerfomed(ActionEvent arg0)
+  {
+    // TODO Auto-generated method stub
+    
+  }
 }