Merge branch 'develop' into features/JAL-845splitPaneMergeDevelop

[jalview.git] / src / jalview / jbgui / GPreferences.java

diff --git a/src/jalview/jbgui/GPreferences.java b/src/jalview/jbgui/GPreferences.java
index 8f226ef..bec4cdb 100755 (executable)
--- a/src/jalview/jbgui/GPreferences.java
+++ b/src/jalview/jbgui/GPreferences.java
@@ -156,7 +156,9 @@ public class GPreferences extends JPanel
 
   protected JPanel maxColour = new JPanel();
 
-  protected JComboBox<String> colour = new JComboBox<String>();
+  protected JComboBox<String> protColour = new JComboBox<String>();
+
+  protected JComboBox<String> nucColour = new JComboBox<String>();
 
   /*
    * Connections tab components
@@ -692,16 +694,30 @@ public class GPreferences extends JPanel
         maxColour_actionPerformed(maxColour);
       }
     });
-    colour.setFont(verdana11);
-    colour.setBounds(new Rectangle(172, 225, 155, 21));
-    JLabel colourLabel = new JLabel();
-    colourLabel.setFont(verdana11);
-    colourLabel.setHorizontalAlignment(SwingConstants.RIGHT);
-    colourLabel.setText(MessageManager.getString("label.alignment_colour")
+
+    protColour.setFont(verdana11);
+    protColour.setBounds(new Rectangle(172, 225, 155, 21));
+    JLabel protColourLabel = new JLabel();
+    protColourLabel.setFont(verdana11);
+    protColourLabel.setHorizontalAlignment(SwingConstants.LEFT);
+    protColourLabel.setText(MessageManager
+            .getString("label.prot_alignment_colour") + " ");
+    JvSwingUtils.addtoLayout(coloursTab, MessageManager
+            .getString("label.default_colour_scheme_for_alignment"),
+            protColourLabel, protColour);
+
+    nucColour.setFont(verdana11);
+    nucColour.setBounds(new Rectangle(172, 240, 155, 21));
+    JLabel nucColourLabel = new JLabel();
+    nucColourLabel.setFont(verdana11);
+    nucColourLabel.setHorizontalAlignment(SwingConstants.LEFT);
+    nucColourLabel.setText(MessageManager
+            .getString("label.nuc_alignment_colour")
             + " ");
     JvSwingUtils.addtoLayout(coloursTab, MessageManager
             .getString("label.default_colour_scheme_for_alignment"),
-            colourLabel, colour);
+            nucColourLabel, nucColour);
+
     JPanel annotationShding = new JPanel();
     annotationShding.setBorder(new TitledBorder(MessageManager
             .getString("label.annotation_shading_default")));