package jalview.jbgui;
import jalview.datamodel.SequenceI;
+import jalview.fts.api.FTSDataColumnI;
+import jalview.fts.core.FTSDataColumnPreferences;
+import jalview.fts.core.FTSDataColumnPreferences.PreferenceSource;
+import jalview.fts.service.pdb.PDBFTSRestClient;
import jalview.gui.AlignmentPanel;
import jalview.gui.Desktop;
import jalview.gui.JvSwingUtils;
-import jalview.jbgui.PDBDocFieldPreferences.PreferenceSource;
import jalview.util.MessageManager;
-import jalview.ws.dbsources.PDBRestClient;
-import jalview.ws.dbsources.PDBRestClient.PDBDocField;
import java.awt.BorderLayout;
import java.awt.CardLayout;
import java.awt.Dimension;
import java.awt.FlowLayout;
+import java.awt.GridLayout;
import java.awt.event.ActionEvent;
import java.awt.event.ItemEvent;
import java.awt.event.ItemListener;
+import java.awt.event.KeyAdapter;
+import java.awt.event.KeyEvent;
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
import java.util.Arrays;
+import java.util.HashMap;
+import java.util.Map;
import javax.swing.ImageIcon;
import javax.swing.JButton;
import javax.swing.event.ChangeListener;
import javax.swing.event.DocumentEvent;
import javax.swing.event.DocumentListener;
+import javax.swing.event.InternalFrameEvent;
+import javax.swing.table.TableColumn;
@SuppressWarnings("serial")
/**
public abstract class GStructureChooser extends JPanel implements
ItemListener
{
+ protected JPanel statusPanel = new JPanel();
+
+ public JLabel statusBar = new JLabel();
+
+ private JPanel pnl_actionsAndStatus = new JPanel(new BorderLayout());
+
protected String frameTitle = MessageManager
.getString("label.structure_chooser");
protected JComboBox<FilterOption> cmb_filterOption = new JComboBox<FilterOption>();
protected AlignmentPanel ap;
-
+
protected StringBuilder errorWarning = new StringBuilder();
protected JLabel lbl_result = new JLabel(
protected JLabel lbl_fromFileStatus = new JLabel(errorImage);
-
protected AssciateSeqPanel idInputAssSeqPanel = new AssciateSeqPanel();
protected AssciateSeqPanel fileChooserAssSeqPanel = new AssciateSeqPanel();
protected static final String VIEWS_LOCAL_PDB = "VIEWS_LOCAL_PDB";
- protected JTable tbl_summary = new JTable()
+ protected JTable tbl_local_pdb = new JTable();
+
+ protected JScrollPane scrl_localPDB = new JScrollPane(tbl_local_pdb);
+
+ private JTabbedPane pnl_filter = new JTabbedPane();
+
+ protected FTSDataColumnPreferences pdbDocFieldPrefs = new FTSDataColumnPreferences(
+ PreferenceSource.STRUCTURE_CHOOSER,
+ PDBFTSRestClient.getInstance());
+
+ protected FTSDataColumnI[] previousWantedFields;
+
+ protected static Map<String, Integer> tempUserPrefs = new HashMap<String, Integer>();
+
+ private JTable tbl_summary = new JTable()
{
+ private boolean inLayout;
+
+ @Override
+ public boolean getScrollableTracksViewportWidth()
+ {
+ return hasExcessWidth();
+
+ }
+
+ @Override
+ public void doLayout()
+ {
+ if (hasExcessWidth())
+ {
+ autoResizeMode = AUTO_RESIZE_SUBSEQUENT_COLUMNS;
+ }
+ inLayout = true;
+ super.doLayout();
+ inLayout = false;
+ autoResizeMode = AUTO_RESIZE_OFF;
+ }
+
+ protected boolean hasExcessWidth()
+ {
+ return getPreferredSize().width < getParent().getWidth();
+ }
+
+ @Override
+ public void columnMarginChanged(ChangeEvent e)
+ {
+ if (isEditing())
+ {
+ removeEditor();
+ }
+ TableColumn resizingColumn = getTableHeader().getResizingColumn();
+ // Need to do this here, before the parent's
+ // layout manager calls getPreferredSize().
+ if (resizingColumn != null && autoResizeMode == AUTO_RESIZE_OFF
+ && !inLayout)
+ {
+ resizingColumn.setPreferredWidth(resizingColumn.getWidth());
+ String colHeader = resizingColumn.getHeaderValue().toString();
+ tempUserPrefs.put(colHeader, resizingColumn.getWidth());
+ }
+ resizeAndRepaint();
+ }
+
+ @Override
public String getToolTipText(MouseEvent evt)
{
String toolTipText = null;
try
{
+ if (getValueAt(rowIndex, colIndex) == null)
+ {
+ return null;
+ }
toolTipText = getValueAt(rowIndex, colIndex).toString();
} catch (Exception e)
{
- e.printStackTrace();
+ // e.printStackTrace();
}
- toolTipText = (toolTipText == null ? null : JvSwingUtils.wrapTooltip(
- true, toolTipText));
+ toolTipText = (toolTipText == null ? null
+ : (toolTipText.length() > 500 ? JvSwingUtils.wrapTooltip(
+ true, "\"" + toolTipText.subSequence(0, 500)
+ + "...\"") : JvSwingUtils.wrapTooltip(true,
+ toolTipText)));
return toolTipText;
}
};
- protected JScrollPane scrl_foundStructures = new JScrollPane(
- tbl_summary);
-
- protected JTable tbl_local_pdb = new JTable();
-
- protected JScrollPane scrl_localPDB = new JScrollPane(tbl_local_pdb);
+ protected JScrollPane scrl_foundStructures = new JScrollPane(tbl_summary);
- private JTabbedPane pnl_filter = new JTabbedPane();
-
- private PDBDocFieldPreferences pdbDocFieldPrefs = new PDBDocFieldPreferences(
- PreferenceSource.STRUCTURE_CHOOSER);
-
- protected PDBDocField[] previousWantedFields;
public GStructureChooser()
{
try
*/
private void jbInit() throws Exception
{
+ Integer width = tempUserPrefs.get("structureChooser.width") == null ? 800
+ : tempUserPrefs.get("structureChooser.width");
+ Integer height = tempUserPrefs.get("structureChooser.height") == null ? 400
+ : tempUserPrefs.get("structureChooser.height");
tbl_summary.setAutoCreateRowSorter(true);
tbl_summary.getTableHeader().setReorderingAllowed(false);
+ tbl_summary.addMouseListener(new MouseAdapter()
+ {
+ @Override
+ public void mouseClicked(MouseEvent e)
+ {
+ validateSelections();
+ }
+
+ @Override
+ public void mouseReleased(MouseEvent e)
+ {
+ validateSelections();
+ }
+ });
+ tbl_summary.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ validateSelections();
+ switch (evt.getKeyCode())
+ {
+ case KeyEvent.VK_ESCAPE: // escape key
+ mainFrame.dispose();
+ break;
+ case KeyEvent.VK_ENTER: // enter key
+ if (btn_view.isEnabled())
+ {
+ ok_ActionPerformed();
+ }
+ break;
+ case KeyEvent.VK_TAB: // tab key
+ if (evt.isShiftDown())
+ {
+ pnl_filter.requestFocus();
+ }
+ else
+ {
+ btn_view.requestFocus();
+ }
+ evt.consume();
+ break;
+ default:
+ return;
+ }
+ }
+ });
tbl_local_pdb.setAutoCreateRowSorter(true);
tbl_local_pdb.getTableHeader().setReorderingAllowed(false);
tbl_local_pdb.addMouseListener(new MouseAdapter()
{
+ @Override
public void mouseClicked(MouseEvent e)
{
- updateCurrentView();
+ validateSelections();
}
+ @Override
public void mouseReleased(MouseEvent e)
{
- updateCurrentView();
+ validateSelections();
+ }
+ });
+ tbl_local_pdb.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ validateSelections();
+ switch (evt.getKeyCode())
+ {
+ case KeyEvent.VK_ESCAPE: // escape key
+ mainFrame.dispose();
+ break;
+ case KeyEvent.VK_ENTER: // enter key
+ if (btn_view.isEnabled())
+ {
+ ok_ActionPerformed();
+ }
+ break;
+ case KeyEvent.VK_TAB: // tab key
+ if (evt.isShiftDown())
+ {
+ cmb_filterOption.requestFocus();
+ }
+ else
+ {
+ if (btn_view.isEnabled())
+ {
+ btn_view.requestFocus();
+ }
+ else
+ {
+ btn_cancel.requestFocus();
+ }
+ }
+ evt.consume();
+ default:
+ return;
+ }
}
});
-
btn_view.setFont(new java.awt.Font("Verdana", 0, 12));
btn_view.setText(MessageManager.getString("action.view"));
btn_view.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
ok_ActionPerformed();
}
});
+ btn_view.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ ok_ActionPerformed();
+ }
+ }
+ });
+
btn_cancel.setFont(new java.awt.Font("Verdana", 0, 12));
btn_cancel.setText(MessageManager.getString("action.cancel"));
btn_cancel.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- mainFrame.dispose();
+ closeAction();
+ }
+ });
+ btn_cancel.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ closeAction();
+ }
}
});
btn_pdbFromFile.setText(btn_title + " ");
btn_pdbFromFile.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
pdbFromFile_actionPerformed();
}
});
+ btn_pdbFromFile.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ pdbFromFile_actionPerformed();
+ }
+ }
+ });
- scrl_foundStructures.setPreferredSize(new Dimension(500, 300));
- scrl_foundStructures
- .setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
+ scrl_foundStructures.setPreferredSize(new Dimension(width, height));
- scrl_localPDB.setPreferredSize(new Dimension(500, 300));
+ scrl_localPDB.setPreferredSize(new Dimension(width, height));
scrl_localPDB
.setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
chk_invertFilter.setFont(new java.awt.Font("Verdana", 0, 12));
chk_rememberSettings.setFont(new java.awt.Font("Verdana", 0, 12));
chk_rememberSettings.setVisible(false);
-
- txt_search.setToolTipText(MessageManager
- .getString("label.enter_pdb_id"));
+ txt_search.setToolTipText(JvSwingUtils.wrapTooltip(true,
+ MessageManager.getString("label.enter_pdb_id")));
cmb_filterOption.setToolTipText(MessageManager
.getString("info.select_filter_option"));
txt_search.getDocument().addDocumentListener(new DocumentListener()
pnl_main.add(chk_invertFilter);
lbl_loading.setVisible(false);
-
pnl_fileChooser.add(btn_pdbFromFile);
pnl_fileChooser.add(lbl_fromFileStatus);
pnl_fileChooserBL.add(fileChooserAssSeqPanel, BorderLayout.NORTH);
pnl_idInput.add(lbl_pdbManualFetchStatus);
pnl_idInputBL.add(idInputAssSeqPanel, BorderLayout.NORTH);
pnl_idInputBL.add(pnl_idInput, BorderLayout.CENTER);
-
+
final String foundStructureSummary = MessageManager
.getString("label.found_structures_summary");
final String configureCols = MessageManager
.getString("label.configure_displayed_columns");
ChangeListener changeListener = new ChangeListener()
{
+ @Override
public void stateChanged(ChangeEvent changeEvent)
{
JTabbedPane sourceTabbedPane = (JTabbedPane) changeEvent
.getSource();
- btn_view.setEnabled(false);
int index = sourceTabbedPane.getSelectedIndex();
- if (sourceTabbedPane.getTitleAt(index)
-.equals(configureCols))
+ btn_view.setVisible(true);
+ btn_cancel.setVisible(true);
+ if (sourceTabbedPane.getTitleAt(index).equals(configureCols))
{
- previousWantedFields = PDBDocFieldPreferences
+ btn_view.setEnabled(false);
+ btn_cancel.setEnabled(false);
+ btn_view.setVisible(false);
+ btn_cancel.setVisible(false);
+ previousWantedFields = pdbDocFieldPrefs
.getStructureSummaryFields().toArray(
- new PDBRestClient.PDBDocField[0]);
+ new FTSDataColumnI[0]);
}
if (sourceTabbedPane.getTitleAt(index)
.equals(foundStructureSummary))
{
+ btn_cancel.setEnabled(true);
if (wantedFieldsUpdated())
{
tabRefresh();
}
};
pnl_filter.addChangeListener(changeListener);
- pnl_filter.setPreferredSize(new Dimension(500, 300));
+ pnl_filter.setPreferredSize(new Dimension(width, height));
pnl_filter.add(foundStructureSummary, scrl_foundStructures);
pnl_filter.add(configureCols, pdbDocFieldPrefs);
-
+
pnl_locPDB.add(scrl_localPDB);
pnl_switchableViews.add(pnl_fileChooserBL, VIEWS_FROM_FILE);
pnl_switchableViews.add(pnl_idInputBL, VIEWS_ENTER_ID);
pnl_switchableViews.add(pnl_filter, VIEWS_FILTER);
pnl_switchableViews.add(pnl_locPDB, VIEWS_LOCAL_PDB);
-
+
this.setLayout(mainLayout);
this.add(pnl_main, java.awt.BorderLayout.NORTH);
this.add(pnl_switchableViews, java.awt.BorderLayout.CENTER);
- this.add(pnl_actions, java.awt.BorderLayout.SOUTH);
-
+ // this.add(pnl_actions, java.awt.BorderLayout.SOUTH);
+ statusPanel.setLayout(new GridLayout());
+ pnl_actionsAndStatus.add(pnl_actions, BorderLayout.CENTER);
+ pnl_actionsAndStatus.add(statusPanel, BorderLayout.SOUTH);
+ statusPanel.add(statusBar, null);
+ this.add(pnl_actionsAndStatus, java.awt.BorderLayout.SOUTH);
+
+ mainFrame
+ .addInternalFrameListener(new javax.swing.event.InternalFrameAdapter()
+ {
+ @Override
+ public void internalFrameClosing(InternalFrameEvent e)
+ {
+ closeAction();
+ }
+ });
mainFrame.setVisible(true);
mainFrame.setContentPane(this);
mainFrame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE);
- Desktop.addInternalFrame(mainFrame, frameTitle, 800, 400);
+ Integer x = tempUserPrefs.get("structureChooser.x");
+ Integer y = tempUserPrefs.get("structureChooser.y");
+ if (x != null && y != null)
+ {
+ mainFrame.setLocation(x, y);
+ }
+ Desktop.addInternalFrame(mainFrame, frameTitle, width, height);
}
+ protected void closeAction()
+ {
+ // System.out.println(">>>>>>>>>> closing internal frame!!!");
+ // System.out.println("width : " + mainFrame.getWidth());
+ // System.out.println("heigh : " + mainFrame.getHeight());
+ // System.out.println("x : " + mainFrame.getX());
+ // System.out.println("y : " + mainFrame.getY());
+ tempUserPrefs.put("structureChooser.width", pnl_filter.getWidth());
+ tempUserPrefs.put("structureChooser.height", pnl_filter.getHeight());
+ tempUserPrefs.put("structureChooser.x", mainFrame.getX());
+ tempUserPrefs.put("structureChooser.y", mainFrame.getY());
+ mainFrame.dispose();
+ }
public boolean wantedFieldsUpdated()
{
if (previousWantedFields == null)
{
return true;
}
-
- return Arrays.equals(PDBDocFieldPreferences.getStructureSummaryFields()
- .toArray(new PDBRestClient.PDBDocField[0]),
- previousWantedFields) ? false : true;
+
+ FTSDataColumnI[] currentWantedFields = pdbDocFieldPrefs
+ .getStructureSummaryFields()
+ .toArray(new FTSDataColumnI[0]);
+ return Arrays.equals(currentWantedFields, previousWantedFields) ? false
+ : true;
}
-
+
@Override
/**
* Event listener for the 'filter' combo-box and 'invert' check-box
this.view = view;
}
+ @Override
public String toString()
{
return this.name;
public class AssociateSeqOptions
{
private SequenceI sequence;
+
private String name;
public AssociateSeqOptions(SequenceI seq)
this.sequence = seq;
}
+ @Override
public String toString()
{
return name;
}
}
+ public JTable getResultTable()
+ {
+ return tbl_summary;
+ }
public JComboBox<FilterOption> getCmbFilterOption()
{
return cmb_filterOption;
git://source.jalview.org / jalview.git / blobdiff