Formatting
[jalview.git] / src / jalview / jbgui / GTreePanel.java
index e67518b..5d3b8b8 100755 (executable)
-package jalview.jbgui;
-
-import java.awt.*;
-import javax.swing.*;
-import java.awt.event.*;
-
-public class GTreePanel extends JInternalFrame
-{
-  BorderLayout borderLayout1 = new BorderLayout();
-  protected JScrollPane scrollPane = new JScrollPane();
-  JMenuBar jMenuBar1 = new JMenuBar();
-  JMenu jMenu1 = new JMenu();
-  JMenuItem saveMenu = new JMenuItem();
-  JMenuItem printMenu = new JMenuItem();
-  JMenu jMenu2 = new JMenu();
-  protected JMenuItem fontSize = new JMenuItem();
-  protected JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
-  protected JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
-  protected JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();
-
-  public GTreePanel()
-  {
-    try
-    {
-      jbInit();
-      this.setJMenuBar(jMenuBar1);
-    }
-    catch(Exception e)
-    {
-      e.printStackTrace();
-    }
-
-  }
-  private void jbInit() throws Exception
-  {
-    this.getContentPane().setLayout(borderLayout1);
-    this.setBackground(Color.white);
-    this.setFont(new java.awt.Font("Verdana", 0, 12));
-    scrollPane.setOpaque(false);
-    jMenu1.setText("File");
-    saveMenu.setEnabled(false);
-    saveMenu.setText("Save");
-    saveMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        saveMenu_actionPerformed(e);
-      }
-    });
-    printMenu.setText("Print");
-    printMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        printMenu_actionPerformed(e);
-      }
-    });
-    jMenu2.setText("View");
-    fontSize.setText("Font Size - 12");
-    fontSize.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        fontSize_actionPerformed(e);
-      }
-    });
-    bootstrapMenu.setText("Show Bootstrap values");
-    bootstrapMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        bootstrapMenu_actionPerformed(e);
-      }
-    });
-    distanceMenu.setText("Show Distances");
-    distanceMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        distanceMenu_actionPerformed(e);
-      }
-    });
-    fitToWindow.setSelected(true);
-    fitToWindow.setText("Fit to window");
-    fitToWindow.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        fitToWindow_actionPerformed(e);
-      }
-    });
-    this.getContentPane().add(scrollPane, BorderLayout.CENTER);
-    jMenuBar1.add(jMenu1);
-    jMenuBar1.add(jMenu2);
-    jMenu1.add(saveMenu);
-    jMenu1.add(printMenu);
-    jMenu2.add(fitToWindow);
-    jMenu2.add(fontSize);
-    jMenu2.add(distanceMenu);
-    jMenu2.add(bootstrapMenu);
-  }
-
-  protected void saveMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void printMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void fontSize_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void distanceMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void bootstrapMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void fitToWindow_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-
-
-
-
-
-}
+/*\r
+ * Jalview - A Sequence Alignment Editor and Viewer\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ *\r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ *\r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
+ * GNU General Public License for more details.\r
+ *\r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
+ */\r
+package jalview.jbgui;\r
+\r
+import java.awt.*;\r
+import java.awt.event.*;\r
+import javax.swing.*;\r
+import javax.swing.event.*;\r
+\r
+public class GTreePanel\r
+    extends JInternalFrame\r
+{\r
+  BorderLayout borderLayout1 = new BorderLayout();\r
+  public JScrollPane scrollPane = new JScrollPane();\r
+  JMenuBar jMenuBar1 = new JMenuBar();\r
+  JMenu fileMenu = new JMenu();\r
+  JMenuItem saveAsNewick = new JMenuItem();\r
+  JMenuItem printMenu = new JMenuItem();\r
+  protected JMenu viewMenu = new JMenu();\r
+  public JMenuItem font = new JMenuItem();\r
+  public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();\r
+  public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();\r
+  public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();\r
+  public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();\r
+  JMenuItem pngTree = new JMenuItem();\r
+  JMenuItem epsTree = new JMenuItem();\r
+  JMenu saveAsMenu = new JMenu();\r
+  JMenuItem textbox = new JMenuItem();\r
+  public JMenuItem originalSeqData = new JMenuItem();\r
+  protected JMenu associateLeavesMenu = new JMenu();\r
+  public GTreePanel()\r
+  {\r
+    try\r
+    {\r
+      jbInit();\r
+      this.setJMenuBar(jMenuBar1);\r
+    }\r
+    catch (Exception e)\r
+    {\r
+      e.printStackTrace();\r
+    }\r
+  }\r
+\r
+  private void jbInit()\r
+      throws Exception\r
+  {\r
+    this.getContentPane().setLayout(borderLayout1);\r
+    this.setBackground(Color.white);\r
+    this.setFont(new java.awt.Font("Verdana", 0, 12));\r
+    scrollPane.setOpaque(false);\r
+    fileMenu.setText("File");\r
+    saveAsNewick.setText("Newick Format");\r
+    saveAsNewick.addActionListener(new ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        saveAsNewick_actionPerformed(e);\r
+      }\r
+    });\r
+    printMenu.setText("Print");\r
+    printMenu.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        printMenu_actionPerformed(e);\r
+      }\r
+    });\r
+    viewMenu.setText("View");\r
+    viewMenu.addMenuListener(new MenuListener()\r
+    {\r
+      public void menuSelected(MenuEvent e)\r
+      {\r
+        viewMenu_menuSelected();\r
+      }\r
+\r
+      public void menuDeselected(MenuEvent e)\r
+      {\r
+      }\r
+\r
+      public void menuCanceled(MenuEvent e)\r
+      {\r
+      }\r
+    });\r
+    font.setText("Font...");\r
+    font.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        font_actionPerformed(e);\r
+      }\r
+    });\r
+    bootstrapMenu.setText("Show Bootstrap Values");\r
+    bootstrapMenu.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        bootstrapMenu_actionPerformed(e);\r
+      }\r
+    });\r
+    distanceMenu.setText("Show Distances");\r
+    distanceMenu.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        distanceMenu_actionPerformed(e);\r
+      }\r
+    });\r
+    fitToWindow.setSelected(true);\r
+    fitToWindow.setText("Fit To Window");\r
+    fitToWindow.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        fitToWindow_actionPerformed(e);\r
+      }\r
+    });\r
+    epsTree.setText("EPS");\r
+    epsTree.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        epsTree_actionPerformed(e);\r
+      }\r
+    });\r
+    pngTree.setText("PNG");\r
+    pngTree.addActionListener(new java.awt.event.ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        pngTree_actionPerformed(e);\r
+      }\r
+    });\r
+    saveAsMenu.setText("Save as");\r
+    placeholdersMenu.setToolTipText(\r
+        "Marks leaves of tree not associated with a sequence");\r
+    placeholdersMenu.setText("Mark Unlinked Leaves");\r
+    placeholdersMenu.addActionListener(new ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        placeholdersMenu_actionPerformed(e);\r
+      }\r
+    });\r
+    textbox.setText("Output to Textbox...");\r
+    textbox.addActionListener(new ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        textbox_actionPerformed(e);\r
+      }\r
+    });\r
+    originalSeqData.setText("Input Data...");\r
+    originalSeqData.addActionListener(new ActionListener()\r
+    {\r
+      public void actionPerformed(ActionEvent e)\r
+      {\r
+        originalSeqData_actionPerformed(e);\r
+      }\r
+    });\r
+    associateLeavesMenu.setText("Associate Leaves With");\r
+    this.getContentPane().add(scrollPane, BorderLayout.CENTER);\r
+    jMenuBar1.add(fileMenu);\r
+    jMenuBar1.add(viewMenu);\r
+    fileMenu.add(saveAsMenu);\r
+    fileMenu.add(textbox);\r
+    fileMenu.add(printMenu);\r
+    fileMenu.add(originalSeqData);\r
+    viewMenu.add(fitToWindow);\r
+    viewMenu.add(font);\r
+    viewMenu.add(distanceMenu);\r
+    viewMenu.add(bootstrapMenu);\r
+    viewMenu.add(placeholdersMenu);\r
+    viewMenu.add(associateLeavesMenu);\r
+    saveAsMenu.add(saveAsNewick);\r
+    saveAsMenu.add(epsTree);\r
+    saveAsMenu.add(pngTree);\r
+  }\r
+\r
+  public void printMenu_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void font_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void distanceMenu_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void bootstrapMenu_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void fitToWindow_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void pngTree_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void epsTree_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void saveAsNewick_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void placeholdersMenu_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void textbox_actionPerformed(ActionEvent e)\r
+  {\r
+  }\r
+\r
+  public void fullid_actionPerformed(ActionEvent e)\r
+  {\r
+\r
+  }\r
+\r
+  public void originalSeqData_actionPerformed(ActionEvent e)\r
+  {\r
+\r
+  }\r
+\r
+  public void viewMenu_menuSelected()\r
+  {\r
+  }\r
+}\r