JAL-2418 source formatting

[jalview.git] / src / jalview / json / binding / biojson / v1 / AnnotationPojo.java

diff --git a/src/jalview/json/binding/biojson/v1/AnnotationPojo.java b/src/jalview/json/binding/biojson/v1/AnnotationPojo.java
index d1cb71c..f01dd52 100644 (file)
--- a/src/jalview/json/binding/biojson/v1/AnnotationPojo.java
+++ b/src/jalview/json/binding/biojson/v1/AnnotationPojo.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -36,13 +36,19 @@ public class AnnotationPojo
 
   @Attributes(
     required = true,
-    enums = { "E", "H", "\u0000", ")", "(" },
+    enums =
+    { "E", "H", "\u0000", ")", "(" },
     description = "Determines what is rendered for the secondary </br>structure <ul><li>’E’ - indicates Beta Sheet/Strand <li>’H’ - indicates alpha helix </li><li> ‘\\u0000’ - indicates blank</li></ul></br>For RNA Helix (only shown when working with</br> nucleotide sequences): <ul><li> ‘(’ - indicates bases pair with columns upstream</br> (to right) </li><li> ’(’ - indicate region pairs with bases to the left</li></ul>")
   private char secondaryStructure;
 
   @Attributes(required = false, description = "Value of the annotation")
   private float value;
 
+  @Attributes(
+    required = false,
+    description = "Colour of the annotation position in hex string.")
+  private String colour;
+
   public String getDisplayCharacter()
   {
     return displayCharacter;
@@ -83,4 +89,14 @@ public class AnnotationPojo
     this.value = value;
   }
 
+  public String getColour()
+  {
+    return colour;
+  }
+
+  public void setColour(String colour)
+  {
+    this.colour = colour;
+  }
+
 }