--- /dev/null
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.log;
+
+import java.io.Serializable;
+import java.nio.charset.StandardCharsets;
+
+import javax.swing.JTextArea;
+import javax.swing.SwingUtilities;
+
+import org.apache.logging.log4j.Level;
+import org.apache.logging.log4j.core.Filter;
+import org.apache.logging.log4j.core.Layout;
+import org.apache.logging.log4j.core.LogEvent;
+import org.apache.logging.log4j.core.appender.AbstractAppender;
+import org.apache.logging.log4j.core.config.Property;
+
+import jalview.log.JLoggerI.LogLevel;
+import jalview.util.Log4j;
+
+/**
+ * From http://textareaappender.zcage.com/ the means to capture the logs, too.
+ * Simple example of creating a Log4j appender that will write to a JTextArea.
+ */
+public class JalviewAppender extends AbstractAppender
+{
+ public final static String NAME = "JalviewAppender";
+
+ public JalviewAppender()
+ {
+ this(LogLevel.INFO);
+ }
+
+ public JalviewAppender(LogLevel loglevel)
+ {
+ super(NAME,
+ Log4j.getThresholdFilter(loglevel == null ? Level.INFO
+ : Log4j.log4jLevel(loglevel)),
+ Log4j.getSimpleLayout(), false, new Property[0]);
+ }
+
+ protected JalviewAppender(String name, Filter filter,
+ Layout<? extends Serializable> layout, boolean ignoreExceptions,
+ Property[] properties)
+ {
+ super(name, filter, layout, ignoreExceptions, properties);
+ // TODO Auto-generated constructor stub
+ }
+
+ static private JTextArea jTextArea = null;
+
+ /** Set the target JTextArea for the logging information to appear. */
+ static public void setTextArea(JTextArea jTextArea)
+ {
+ JalviewAppender.jTextArea = jTextArea;
+ }
+
+ /**
+ * Format and then append the loggingEvent to the stored JTextArea.
+ */
+ public void append(LogEvent logEvent)
+ {
+ final String message = new String(
+ this.getLayout().toByteArray(logEvent), StandardCharsets.UTF_8);
+
+ // Append formatted message to textarea using the Swing Thread.
+ SwingUtilities.invokeLater(new Runnable()
+ {
+ public void run()
+ {
+ if (jTextArea != null)
+ {
+ jTextArea.append(message);
+ }
+ }
+ });
+ }
+}