Merge branch 'jims/bug/JAL-4298_java_console_causing_hang_at_startup' into develop

[jalview.git] / src / jalview / project / Jalview2XML.java

diff --git a/src/jalview/project/Jalview2XML.java b/src/jalview/project/Jalview2XML.java
index af3b2c8..cc20fce 100644 (file)
--- a/src/jalview/project/Jalview2XML.java
+++ b/src/jalview/project/Jalview2XML.java
@@ -631,7 +631,7 @@ public class Jalview2XML
    */
   public void saveState(JarOutputStream jout)
   {
-    AlignFrame[] frames = Desktop.getAlignFrames();
+    AlignFrame[] frames = Desktop.getDesktopAlignFrames();
 
     setStateSavedUpToDate(true);
 
@@ -6919,7 +6919,7 @@ public class Jalview2XML
     if (stateSavedUpToDate()) // nothing happened since last project save
       return true;
 
-    AlignFrame[] frames = Desktop.getAlignFrames();
+    AlignFrame[] frames = Desktop.getDesktopAlignFrames();
     if (frames != null)
     {
       for (int i = 0; i < frames.length; i++)