JAL-4386 Added preferences for secondary structure consensus and it is

[jalview.git] / src / jalview / renderer / AnnotationRenderer.java

diff --git a/src/jalview/renderer/AnnotationRenderer.java b/src/jalview/renderer/AnnotationRenderer.java
index a56f06c..4e9f669 100644 (file)
--- a/src/jalview/renderer/AnnotationRenderer.java
+++ b/src/jalview/renderer/AnnotationRenderer.java
@@ -56,6 +56,7 @@ import jalview.schemes.ColourSchemeI;
 import jalview.schemes.NucleotideColourScheme;
 import jalview.schemes.ResidueProperties;
 import jalview.schemes.ZappoColourScheme;
+import jalview.util.MessageManager;
 import jalview.util.Platform;
 
 public class AnnotationRenderer
@@ -431,7 +432,7 @@ public class AnnotationRenderer
       }
     }
     
-    else if(aa.autoCalculated && aa.label.startsWith("SecondaryStructureConsensus")) 
+    else if(aa.autoCalculated && aa.label.startsWith(MessageManager.getString("label.ssconsensus_label"))) 
     {
       return AAFrequency.extractProfile(
               hSSconsensus.get(column),
@@ -1618,7 +1619,7 @@ public class AnnotationRenderer
               colour = profcolour.findColour(codonTranslation.charAt(0),
                       column, null);
             }
-            if(_aa.label == "SecondaryStructureConsensus") {
+            if(_aa.label == MessageManager.getString("label.ssconsensus_label")) {
               colour = AlignmentUtils.getSecondaryStructureAnnotationColour(dc[0]);              
             }
             else