JAL-98 use Profile to store consensus, ResidueCount for fast compact

[jalview.git] / src / jalview / renderer / AnnotationRenderer.java

diff --git a/src/jalview/renderer/AnnotationRenderer.java b/src/jalview/renderer/AnnotationRenderer.java
index e58ba02..e12b88a 100644 (file)
--- a/src/jalview/renderer/AnnotationRenderer.java
+++ b/src/jalview/renderer/AnnotationRenderer.java
@@ -22,6 +22,7 @@ package jalview.renderer;
 
 import jalview.analysis.AAFrequency;
 import jalview.analysis.CodingUtils;
+import jalview.analysis.Profile;
 import jalview.analysis.Rna;
 import jalview.analysis.StructureFrequency;
 import jalview.api.AlignViewportI;
@@ -73,7 +74,7 @@ public class AnnotationRenderer
 
   private ColumnSelection columnSelection;
 
-  private Hashtable[] hconsensus;
+  private Profile[] hconsensus;
 
   private Hashtable[] complementConsensus;