/*\r
- * This class was automatically generated with \r
+ * This class was automatically generated with\r
* <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
* Schema.\r
* $Id$\r
\r
package jalview.schemabinding.version2;\r
\r
- //---------------------------------/\r
- //- Imported classes and packages -/\r
+//---------------------------------/\r
+//- Imported classes and packages -/\r
//---------------------------------/\r
\r
-import java.io.IOException;\r
-import java.io.Reader;\r
-import java.io.Serializable;\r
-import java.io.Writer;\r
-import org.exolab.castor.xml.MarshalException;\r
-import org.exolab.castor.xml.Marshaller;\r
-import org.exolab.castor.xml.Unmarshaller;\r
-import org.exolab.castor.xml.ValidationException;\r
-import org.xml.sax.ContentHandler;\r
+import org.exolab.castor.xml.*;\r
\r
/**\r
* Class AnnotationColours.\r
- * \r
+ *\r
* @version $Revision$ $Date$\r
*/\r
-public class AnnotationColours implements java.io.Serializable {\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _aboveThreshold\r
- */\r
- private int _aboveThreshold;\r
-\r
- /**\r
- * keeps track of state for field: _aboveThreshold\r
- */\r
- private boolean _has_aboveThreshold;\r
-\r
- /**\r
- * Field _annotation\r
- */\r
- private java.lang.String _annotation;\r
-\r
- /**\r
- * Field _minColour\r
- */\r
- private int _minColour;\r
-\r
- /**\r
- * keeps track of state for field: _minColour\r
- */\r
- private boolean _has_minColour;\r
-\r
- /**\r
- * Field _maxColour\r
- */\r
- private int _maxColour;\r
-\r
- /**\r
- * keeps track of state for field: _maxColour\r
- */\r
- private boolean _has_maxColour;\r
-\r
- /**\r
- * Field _colourScheme\r
- */\r
- private java.lang.String _colourScheme;\r
-\r
- /**\r
- * Field _threshold\r
- */\r
- private float _threshold;\r
-\r
- /**\r
- * keeps track of state for field: _threshold\r
- */\r
- private boolean _has_threshold;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public AnnotationColours() {\r
- super();\r
- } //-- jalview.schemabinding.version2.AnnotationColours()\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * Method deleteAboveThreshold\r
- * \r
- */\r
- public void deleteAboveThreshold()\r
- {\r
- this._has_aboveThreshold= false;\r
- } //-- void deleteAboveThreshold() \r
-\r
- /**\r
- * Method deleteMaxColour\r
- * \r
- */\r
- public void deleteMaxColour()\r
- {\r
- this._has_maxColour= false;\r
- } //-- void deleteMaxColour() \r
-\r
- /**\r
- * Method deleteMinColour\r
- * \r
- */\r
- public void deleteMinColour()\r
- {\r
- this._has_minColour= false;\r
- } //-- void deleteMinColour() \r
-\r
- /**\r
- * Method deleteThreshold\r
- * \r
- */\r
- public void deleteThreshold()\r
- {\r
- this._has_threshold= false;\r
- } //-- void deleteThreshold() \r
-\r
- /**\r
- * Returns the value of field 'aboveThreshold'.\r
- * \r
- * @return int\r
- * @return the value of field 'aboveThreshold'.\r
- */\r
- public int getAboveThreshold()\r
- {\r
- return this._aboveThreshold;\r
- } //-- int getAboveThreshold() \r
-\r
- /**\r
- * Returns the value of field 'annotation'.\r
- * \r
- * @return String\r
- * @return the value of field 'annotation'.\r
- */\r
- public java.lang.String getAnnotation()\r
- {\r
- return this._annotation;\r
- } //-- java.lang.String getAnnotation() \r
-\r
- /**\r
- * Returns the value of field 'colourScheme'.\r
- * \r
- * @return String\r
- * @return the value of field 'colourScheme'.\r
- */\r
- public java.lang.String getColourScheme()\r
- {\r
- return this._colourScheme;\r
- } //-- java.lang.String getColourScheme() \r
-\r
- /**\r
- * Returns the value of field 'maxColour'.\r
- * \r
- * @return int\r
- * @return the value of field 'maxColour'.\r
- */\r
- public int getMaxColour()\r
- {\r
- return this._maxColour;\r
- } //-- int getMaxColour() \r
-\r
- /**\r
- * Returns the value of field 'minColour'.\r
- * \r
- * @return int\r
- * @return the value of field 'minColour'.\r
- */\r
- public int getMinColour()\r
- {\r
- return this._minColour;\r
- } //-- int getMinColour() \r
-\r
- /**\r
- * Returns the value of field 'threshold'.\r
- * \r
- * @return float\r
- * @return the value of field 'threshold'.\r
- */\r
- public float getThreshold()\r
- {\r
- return this._threshold;\r
- } //-- float getThreshold() \r
-\r
- /**\r
- * Method hasAboveThreshold\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasAboveThreshold()\r
- {\r
- return this._has_aboveThreshold;\r
- } //-- boolean hasAboveThreshold() \r
-\r
- /**\r
- * Method hasMaxColour\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasMaxColour()\r
- {\r
- return this._has_maxColour;\r
- } //-- boolean hasMaxColour() \r
-\r
- /**\r
- * Method hasMinColour\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasMinColour()\r
- {\r
- return this._has_minColour;\r
- } //-- boolean hasMinColour() \r
-\r
- /**\r
- * Method hasThreshold\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasThreshold()\r
- {\r
- return this._has_threshold;\r
- } //-- boolean hasThreshold() \r
-\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Sets the value of field 'aboveThreshold'.\r
- * \r
- * @param aboveThreshold the value of field 'aboveThreshold'.\r
- */\r
- public void setAboveThreshold(int aboveThreshold)\r
- {\r
- this._aboveThreshold = aboveThreshold;\r
- this._has_aboveThreshold = true;\r
- } //-- void setAboveThreshold(int) \r
-\r
- /**\r
- * Sets the value of field 'annotation'.\r
- * \r
- * @param annotation the value of field 'annotation'.\r
- */\r
- public void setAnnotation(java.lang.String annotation)\r
- {\r
- this._annotation = annotation;\r
- } //-- void setAnnotation(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'colourScheme'.\r
- * \r
- * @param colourScheme the value of field 'colourScheme'.\r
- */\r
- public void setColourScheme(java.lang.String colourScheme)\r
- {\r
- this._colourScheme = colourScheme;\r
- } //-- void setColourScheme(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'maxColour'.\r
- * \r
- * @param maxColour the value of field 'maxColour'.\r
- */\r
- public void setMaxColour(int maxColour)\r
- {\r
- this._maxColour = maxColour;\r
- this._has_maxColour = true;\r
- } //-- void setMaxColour(int) \r
-\r
- /**\r
- * Sets the value of field 'minColour'.\r
- * \r
- * @param minColour the value of field 'minColour'.\r
- */\r
- public void setMinColour(int minColour)\r
- {\r
- this._minColour = minColour;\r
- this._has_minColour = true;\r
- } //-- void setMinColour(int) \r
-\r
- /**\r
- * Sets the value of field 'threshold'.\r
- * \r
- * @param threshold the value of field 'threshold'.\r
- */\r
- public void setThreshold(float threshold)\r
- {\r
- this._threshold = threshold;\r
- this._has_threshold = true;\r
- } //-- void setThreshold(float) \r
-\r
- /**\r
- * Method unmarshal\r
- * \r
- * \r
- * \r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+public class AnnotationColours\r
+ implements java.io.Serializable\r
+{\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _aboveThreshold\r
+ */\r
+ private int _aboveThreshold;\r
+\r
+ /**\r
+ * keeps track of state for field: _aboveThreshold\r
+ */\r
+ private boolean _has_aboveThreshold;\r
+\r
+ /**\r
+ * Field _annotation\r
+ */\r
+ private java.lang.String _annotation;\r
+\r
+ /**\r
+ * Field _minColour\r
+ */\r
+ private int _minColour;\r
+\r
+ /**\r
+ * keeps track of state for field: _minColour\r
+ */\r
+ private boolean _has_minColour;\r
+\r
+ /**\r
+ * Field _maxColour\r
+ */\r
+ private int _maxColour;\r
+\r
+ /**\r
+ * keeps track of state for field: _maxColour\r
+ */\r
+ private boolean _has_maxColour;\r
+\r
+ /**\r
+ * Field _colourScheme\r
+ */\r
+ private java.lang.String _colourScheme;\r
+\r
+ /**\r
+ * Field _threshold\r
+ */\r
+ private float _threshold;\r
+\r
+ /**\r
+ * keeps track of state for field: _threshold\r
+ */\r
+ private boolean _has_threshold;\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public AnnotationColours()\r
+ {\r
+ super();\r
+ } //-- jalview.schemabinding.version2.AnnotationColours()\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ * Method deleteAboveThreshold\r
+ *\r
+ */\r
+ public void deleteAboveThreshold()\r
+ {\r
+ this._has_aboveThreshold = false;\r
+ } //-- void deleteAboveThreshold()\r
+\r
+ /**\r
+ * Method deleteMaxColour\r
+ *\r
+ */\r
+ public void deleteMaxColour()\r
+ {\r
+ this._has_maxColour = false;\r
+ } //-- void deleteMaxColour()\r
+\r
+ /**\r
+ * Method deleteMinColour\r
+ *\r
+ */\r
+ public void deleteMinColour()\r
+ {\r
+ this._has_minColour = false;\r
+ } //-- void deleteMinColour()\r
+\r
+ /**\r
+ * Method deleteThreshold\r
+ *\r
+ */\r
+ public void deleteThreshold()\r
+ {\r
+ this._has_threshold = false;\r
+ } //-- void deleteThreshold()\r
+\r
+ /**\r
+ * Returns the value of field 'aboveThreshold'.\r
+ *\r
+ * @return int\r
+ * @return the value of field 'aboveThreshold'.\r
+ */\r
+ public int getAboveThreshold()\r
+ {\r
+ return this._aboveThreshold;\r
+ } //-- int getAboveThreshold()\r
+\r
+ /**\r
+ * Returns the value of field 'annotation'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'annotation'.\r
+ */\r
+ public java.lang.String getAnnotation()\r
+ {\r
+ return this._annotation;\r
+ } //-- java.lang.String getAnnotation()\r
+\r
+ /**\r
+ * Returns the value of field 'colourScheme'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'colourScheme'.\r
+ */\r
+ public java.lang.String getColourScheme()\r
+ {\r
+ return this._colourScheme;\r
+ } //-- java.lang.String getColourScheme()\r
+\r
+ /**\r
+ * Returns the value of field 'maxColour'.\r
+ *\r
+ * @return int\r
+ * @return the value of field 'maxColour'.\r
+ */\r
+ public int getMaxColour()\r
+ {\r
+ return this._maxColour;\r
+ } //-- int getMaxColour()\r
+\r
+ /**\r
+ * Returns the value of field 'minColour'.\r
+ *\r
+ * @return int\r
+ * @return the value of field 'minColour'.\r
+ */\r
+ public int getMinColour()\r
+ {\r
+ return this._minColour;\r
+ } //-- int getMinColour()\r
+\r
+ /**\r
+ * Returns the value of field 'threshold'.\r
+ *\r
+ * @return float\r
+ * @return the value of field 'threshold'.\r
+ */\r
+ public float getThreshold()\r
+ {\r
+ return this._threshold;\r
+ } //-- float getThreshold()\r
+\r
+ /**\r
+ * Method hasAboveThreshold\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasAboveThreshold()\r
+ {\r
+ return this._has_aboveThreshold;\r
+ } //-- boolean hasAboveThreshold()\r
+\r
+ /**\r
+ * Method hasMaxColour\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasMaxColour()\r
+ {\r
+ return this._has_maxColour;\r
+ } //-- boolean hasMaxColour()\r
+\r
+ /**\r
+ * Method hasMinColour\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasMinColour()\r
+ {\r
+ return this._has_minColour;\r
+ } //-- boolean hasMinColour()\r
+\r
+ /**\r
+ * Method hasThreshold\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasThreshold()\r
+ {\r
+ return this._has_threshold;\r
+ } //-- boolean hasThreshold()\r
+\r
+ /**\r
+ * Method isValid\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean isValid()\r
+ {\r
+ try\r
{\r
- return (jalview.schemabinding.version2.AnnotationColours) Unmarshaller.unmarshal(jalview.schemabinding.version2.AnnotationColours.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
-\r
- /**\r
- * Method validate\r
- * \r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
+ validate();\r
+ }\r
+ catch (org.exolab.castor.xml.ValidationException vex)\r
{\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- } //-- void validate() \r
+ return false;\r
+ }\r
+ return true;\r
+ } //-- boolean isValid()\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param out\r
+ */\r
+ public void marshal(java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, out);\r
+ } //-- void marshal(java.io.Writer)\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param handler\r
+ */\r
+ public void marshal(org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, handler);\r
+ } //-- void marshal(org.xml.sax.ContentHandler)\r
+\r
+ /**\r
+ * Sets the value of field 'aboveThreshold'.\r
+ *\r
+ * @param aboveThreshold the value of field 'aboveThreshold'.\r
+ */\r
+ public void setAboveThreshold(int aboveThreshold)\r
+ {\r
+ this._aboveThreshold = aboveThreshold;\r
+ this._has_aboveThreshold = true;\r
+ } //-- void setAboveThreshold(int)\r
+\r
+ /**\r
+ * Sets the value of field 'annotation'.\r
+ *\r
+ * @param annotation the value of field 'annotation'.\r
+ */\r
+ public void setAnnotation(java.lang.String annotation)\r
+ {\r
+ this._annotation = annotation;\r
+ } //-- void setAnnotation(java.lang.String)\r
+\r
+ /**\r
+ * Sets the value of field 'colourScheme'.\r
+ *\r
+ * @param colourScheme the value of field 'colourScheme'.\r
+ */\r
+ public void setColourScheme(java.lang.String colourScheme)\r
+ {\r
+ this._colourScheme = colourScheme;\r
+ } //-- void setColourScheme(java.lang.String)\r
+\r
+ /**\r
+ * Sets the value of field 'maxColour'.\r
+ *\r
+ * @param maxColour the value of field 'maxColour'.\r
+ */\r
+ public void setMaxColour(int maxColour)\r
+ {\r
+ this._maxColour = maxColour;\r
+ this._has_maxColour = true;\r
+ } //-- void setMaxColour(int)\r
+\r
+ /**\r
+ * Sets the value of field 'minColour'.\r
+ *\r
+ * @param minColour the value of field 'minColour'.\r
+ */\r
+ public void setMinColour(int minColour)\r
+ {\r
+ this._minColour = minColour;\r
+ this._has_minColour = true;\r
+ } //-- void setMinColour(int)\r
+\r
+ /**\r
+ * Sets the value of field 'threshold'.\r
+ *\r
+ * @param threshold the value of field 'threshold'.\r
+ */\r
+ public void setThreshold(float threshold)\r
+ {\r
+ this._threshold = threshold;\r
+ this._has_threshold = true;\r
+ } //-- void setThreshold(float)\r
+\r
+ /**\r
+ * Method unmarshal\r
+ *\r
+ *\r
+ *\r
+ * @param reader\r
+ * @return Object\r
+ */\r
+ public static java.lang.Object unmarshal(java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ return (jalview.schemabinding.version2.AnnotationColours) Unmarshaller.\r
+ unmarshal(jalview.schemabinding.version2.AnnotationColours.class,\r
+ reader);\r
+ } //-- java.lang.Object unmarshal(java.io.Reader)\r
+\r
+ /**\r
+ * Method validate\r
+ *\r
+ */\r
+ public void validate()\r
+ throws org.exolab.castor.xml.ValidationException\r
+ {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.\r
+ Validator();\r
+ validator.validate(this);\r
+ } //-- void validate()\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff