+++ /dev/null
-/*
- * This class was automatically generated with
- * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
- * Schema.
- * $Id$
- */
-
-package jalview.schemabinding.version2;
-
-//---------------------------------/
-//- Imported classes and packages -/
-//---------------------------------/
-
-import org.exolab.castor.xml.Marshaller;
-import org.exolab.castor.xml.Unmarshaller;
-
-/**
- * Class DoubleMatrix.
- *
- * @version $Revision$ $Date$
- */
-public class DoubleMatrix implements java.io.Serializable
-{
-
- // --------------------------/
- // - Class/Member Variables -/
- // --------------------------/
-
- /**
- * Field _rows.
- */
- private int _rows;
-
- /**
- * keeps track of state for field: _rows
- */
- private boolean _has_rows;
-
- /**
- * Field _columns.
- */
- private int _columns;
-
- /**
- * keeps track of state for field: _columns
- */
- private boolean _has_columns;
-
- /**
- * Field _rowList.
- */
- private java.util.Vector _rowList;
-
- /**
- * Field _d.
- */
- private jalview.schemabinding.version2.D _d;
-
- /**
- * Field _e.
- */
- private jalview.schemabinding.version2.E _e;
-
- // ----------------/
- // - Constructors -/
- // ----------------/
-
- public DoubleMatrix()
- {
- super();
- this._rowList = new java.util.Vector();
- }
-
- // -----------/
- // - Methods -/
- // -----------/
-
- /**
- *
- *
- * @param vRow
- * @throws java.lang.IndexOutOfBoundsException
- * if the index given is outside the bounds of the collection
- */
- public void addRow(final jalview.schemabinding.version2.Row vRow)
- throws java.lang.IndexOutOfBoundsException
- {
- this._rowList.addElement(vRow);
- }
-
- /**
- *
- *
- * @param index
- * @param vRow
- * @throws java.lang.IndexOutOfBoundsException
- * if the index given is outside the bounds of the collection
- */
- public void addRow(final int index,
- final jalview.schemabinding.version2.Row vRow)
- throws java.lang.IndexOutOfBoundsException
- {
- this._rowList.add(index, vRow);
- }
-
- /**
- */
- public void deleteColumns()
- {
- this._has_columns = false;
- }
-
- /**
- */
- public void deleteRows()
- {
- this._has_rows = false;
- }
-
- /**
- * Method enumerateRow.
- *
- * @return an Enumeration over all jalview.schemabinding.version2.Row elements
- */
- public java.util.Enumeration enumerateRow()
- {
- return this._rowList.elements();
- }
-
- /**
- * Returns the value of field 'columns'.
- *
- * @return the value of field 'Columns'.
- */
- public int getColumns()
- {
- return this._columns;
- }
-
- /**
- * Returns the value of field 'd'.
- *
- * @return the value of field 'D'.
- */
- public jalview.schemabinding.version2.D getD()
- {
- return this._d;
- }
-
- /**
- * Returns the value of field 'e'.
- *
- * @return the value of field 'E'.
- */
- public jalview.schemabinding.version2.E getE()
- {
- return this._e;
- }
-
- /**
- * Method getRow.
- *
- * @param index
- * @throws java.lang.IndexOutOfBoundsException
- * if the index given is outside the bounds of the collection
- * @return the value of the jalview.schemabinding.version2.Row at the given
- * index
- */
- public jalview.schemabinding.version2.Row getRow(final int index)
- throws java.lang.IndexOutOfBoundsException
- {
- // check bounds for index
- if (index < 0 || index >= this._rowList.size())
- {
- throw new IndexOutOfBoundsException("getRow: Index value '" + index
- + "' not in range [0.." + (this._rowList.size() - 1) + "]");
- }
-
- return (jalview.schemabinding.version2.Row) _rowList.get(index);
- }
-
- /**
- * Method getRow.Returns the contents of the collection in an Array.
- * <p>
- * Note: Just in case the collection contents are changing in another thread,
- * we pass a 0-length Array of the correct type into the API call. This way we
- * <i>know</i> that the Array returned is of exactly the correct length.
- *
- * @return this collection as an Array
- */
- public jalview.schemabinding.version2.Row[] getRow()
- {
- jalview.schemabinding.version2.Row[] array = new jalview.schemabinding.version2.Row[0];
- return (jalview.schemabinding.version2.Row[]) this._rowList
- .toArray(array);
- }
-
- /**
- * Method getRowCount.
- *
- * @return the size of this collection
- */
- public int getRowCount()
- {
- return this._rowList.size();
- }
-
- /**
- * Returns the value of field 'rows'.
- *
- * @return the value of field 'Rows'.
- */
- public int getRows()
- {
- return this._rows;
- }
-
- /**
- * Method hasColumns.
- *
- * @return true if at least one Columns has been added
- */
- public boolean hasColumns()
- {
- return this._has_columns;
- }
-
- /**
- * Method hasRows.
- *
- * @return true if at least one Rows has been added
- */
- public boolean hasRows()
- {
- return this._has_rows;
- }
-
- /**
- * Method isValid.
- *
- * @return true if this object is valid according to the schema
- */
- public boolean isValid()
- {
- try
- {
- validate();
- } catch (org.exolab.castor.xml.ValidationException vex)
- {
- return false;
- }
- return true;
- }
-
- /**
- *
- *
- * @param out
- * @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
- * @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the schema
- */
- public void marshal(final java.io.Writer out)
- throws org.exolab.castor.xml.MarshalException,
- org.exolab.castor.xml.ValidationException
- {
- Marshaller.marshal(this, out);
- }
-
- /**
- *
- *
- * @param handler
- * @throws java.io.IOException
- * if an IOException occurs during marshaling
- * @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the schema
- * @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
- */
- public void marshal(final org.xml.sax.ContentHandler handler)
- throws java.io.IOException,
- org.exolab.castor.xml.MarshalException,
- org.exolab.castor.xml.ValidationException
- {
- Marshaller.marshal(this, handler);
- }
-
- /**
- */
- public void removeAllRow()
- {
- this._rowList.clear();
- }
-
- /**
- * Method removeRow.
- *
- * @param vRow
- * @return true if the object was removed from the collection.
- */
- public boolean removeRow(final jalview.schemabinding.version2.Row vRow)
- {
- boolean removed = _rowList.remove(vRow);
- return removed;
- }
-
- /**
- * Method removeRowAt.
- *
- * @param index
- * @return the element removed from the collection
- */
- public jalview.schemabinding.version2.Row removeRowAt(final int index)
- {
- java.lang.Object obj = this._rowList.remove(index);
- return (jalview.schemabinding.version2.Row) obj;
- }
-
- /**
- * Sets the value of field 'columns'.
- *
- * @param columns
- * the value of field 'columns'.
- */
- public void setColumns(final int columns)
- {
- this._columns = columns;
- this._has_columns = true;
- }
-
- /**
- * Sets the value of field 'd'.
- *
- * @param d
- * the value of field 'd'.
- */
- public void setD(final jalview.schemabinding.version2.D d)
- {
- this._d = d;
- }
-
- /**
- * Sets the value of field 'e'.
- *
- * @param e
- * the value of field 'e'.
- */
- public void setE(final jalview.schemabinding.version2.E e)
- {
- this._e = e;
- }
-
- /**
- *
- *
- * @param index
- * @param vRow
- * @throws java.lang.IndexOutOfBoundsException
- * if the index given is outside the bounds of the collection
- */
- public void setRow(final int index,
- final jalview.schemabinding.version2.Row vRow)
- throws java.lang.IndexOutOfBoundsException
- {
- // check bounds for index
- if (index < 0 || index >= this._rowList.size())
- {
- throw new IndexOutOfBoundsException("setRow: Index value '" + index
- + "' not in range [0.." + (this._rowList.size() - 1) + "]");
- }
-
- this._rowList.set(index, vRow);
- }
-
- /**
- *
- *
- * @param vRowArray
- */
- public void setRow(final jalview.schemabinding.version2.Row[] vRowArray)
- {
- // -- copy array
- _rowList.clear();
-
- for (int i = 0; i < vRowArray.length; i++)
- {
- this._rowList.add(vRowArray[i]);
- }
- }
-
- /**
- * Sets the value of field 'rows'.
- *
- * @param rows
- * the value of field 'rows'.
- */
- public void setRows(final int rows)
- {
- this._rows = rows;
- this._has_rows = true;
- }
-
- /**
- * Method unmarshal.
- *
- * @param reader
- * @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
- * @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the schema
- * @return the unmarshaled jalview.schemabinding.version2.DoubleMatrix
- */
- public static jalview.schemabinding.version2.DoubleMatrix unmarshal(
- final java.io.Reader reader)
- throws org.exolab.castor.xml.MarshalException,
- org.exolab.castor.xml.ValidationException
- {
- return (jalview.schemabinding.version2.DoubleMatrix) Unmarshaller
- .unmarshal(jalview.schemabinding.version2.DoubleMatrix.class,
- reader);
- }
-
- /**
- *
- *
- * @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the schema
- */
- public void validate() throws org.exolab.castor.xml.ValidationException
- {
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
- validator.validate(this);
- }
-
-}
git://source.jalview.org / jalview.git / blobdiff