Saves Jmol status
[jalview.git] / src / jalview / schemabinding / version2 / Pdbids.java
index 8625b88..347ff35 100755 (executable)
@@ -1,5 +1,5 @@
 /*\r
- * This class was automatically generated with\r
+ * This class was automatically generated with \r
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
  * Schema.\r
  * $Id$\r
 \r
 package jalview.schemabinding.version2;\r
 \r
-//---------------------------------/\r
-//- Imported classes and packages -/\r
+  //---------------------------------/\r
+ //- Imported classes and packages -/\r
 //---------------------------------/\r
 \r
-import org.exolab.castor.xml.*;\r
+import java.io.IOException;\r
+import java.io.Reader;\r
+import java.io.Serializable;\r
+import java.io.Writer;\r
+import java.util.Enumeration;\r
+import java.util.Vector;\r
+import org.exolab.castor.xml.MarshalException;\r
+import org.exolab.castor.xml.Marshaller;\r
+import org.exolab.castor.xml.Unmarshaller;\r
+import org.exolab.castor.xml.ValidationException;\r
+import org.xml.sax.ContentHandler;\r
 \r
 /**\r
  * Class Pdbids.\r
- *\r
+ * \r
  * @version $Revision$ $Date$\r
  */\r
-public class Pdbids\r
-    extends Pdbentry implements java.io.Serializable\r
+public class Pdbids extends jalview.schemabinding.version2.Pdbentry \r
+implements java.io.Serializable\r
 {\r
 \r
-  //----------------/\r
-  //- Constructors -/\r
-  //----------------/\r
-\r
-  public Pdbids()\r
-  {\r
-    super();\r
-  } //-- jalview.schemabinding.version2.Pdbids()\r
-\r
-  //-----------/\r
-  //- Methods -/\r
-  //-----------/\r
-\r
-  /**\r
-   * Method isValid\r
-   *\r
-   *\r
-   *\r
-   * @return boolean\r
-   */\r
-  public boolean isValid()\r
-  {\r
-    try\r
+\r
+      //--------------------------/\r
+     //- Class/Member Variables -/\r
+    //--------------------------/\r
+\r
+    /**\r
+     * Field _structureStateList\r
+     */\r
+    private java.util.Vector _structureStateList;\r
+\r
+\r
+      //----------------/\r
+     //- Constructors -/\r
+    //----------------/\r
+\r
+    public Pdbids() {\r
+        super();\r
+        _structureStateList = new Vector();\r
+    } //-- jalview.schemabinding.version2.Pdbids()\r
+\r
+\r
+      //-----------/\r
+     //- Methods -/\r
+    //-----------/\r
+\r
+    /**\r
+     * Method addStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param vStructureState\r
+     */\r
+    public void addStructureState(jalview.schemabinding.version2.StructureState vStructureState)\r
+        throws java.lang.IndexOutOfBoundsException\r
+    {\r
+        _structureStateList.addElement(vStructureState);\r
+    } //-- void addStructureState(jalview.schemabinding.version2.StructureState) \r
+\r
+    /**\r
+     * Method addStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param index\r
+     * @param vStructureState\r
+     */\r
+    public void addStructureState(int index, jalview.schemabinding.version2.StructureState vStructureState)\r
+        throws java.lang.IndexOutOfBoundsException\r
+    {\r
+        _structureStateList.insertElementAt(vStructureState, index);\r
+    } //-- void addStructureState(int, jalview.schemabinding.version2.StructureState) \r
+\r
+    /**\r
+     * Method enumerateStructureState\r
+     * \r
+     * \r
+     * \r
+     * @return Enumeration\r
+     */\r
+    public java.util.Enumeration enumerateStructureState()\r
+    {\r
+        return _structureStateList.elements();\r
+    } //-- java.util.Enumeration enumerateStructureState() \r
+\r
+    /**\r
+     * Method getStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param index\r
+     * @return StructureState\r
+     */\r
+    public jalview.schemabinding.version2.StructureState getStructureState(int index)\r
+        throws java.lang.IndexOutOfBoundsException\r
+    {\r
+        //-- check bounds for index\r
+        if ((index < 0) || (index > _structureStateList.size())) {\r
+            throw new IndexOutOfBoundsException();\r
+        }\r
+        \r
+        return (jalview.schemabinding.version2.StructureState) _structureStateList.elementAt(index);\r
+    } //-- jalview.schemabinding.version2.StructureState getStructureState(int) \r
+\r
+    /**\r
+     * Method getStructureState\r
+     * \r
+     * \r
+     * \r
+     * @return StructureState\r
+     */\r
+    public jalview.schemabinding.version2.StructureState[] getStructureState()\r
+    {\r
+        int size = _structureStateList.size();\r
+        jalview.schemabinding.version2.StructureState[] mArray = new jalview.schemabinding.version2.StructureState[size];\r
+        for (int index = 0; index < size; index++) {\r
+            mArray[index] = (jalview.schemabinding.version2.StructureState) _structureStateList.elementAt(index);\r
+        }\r
+        return mArray;\r
+    } //-- jalview.schemabinding.version2.StructureState[] getStructureState() \r
+\r
+    /**\r
+     * Method getStructureStateCount\r
+     * \r
+     * \r
+     * \r
+     * @return int\r
+     */\r
+    public int getStructureStateCount()\r
+    {\r
+        return _structureStateList.size();\r
+    } //-- int getStructureStateCount() \r
+\r
+    /**\r
+     * Method isValid\r
+     * \r
+     * \r
+     * \r
+     * @return boolean\r
+     */\r
+    public boolean isValid()\r
+    {\r
+        try {\r
+            validate();\r
+        }\r
+        catch (org.exolab.castor.xml.ValidationException vex) {\r
+            return false;\r
+        }\r
+        return true;\r
+    } //-- boolean isValid() \r
+\r
+    /**\r
+     * Method marshal\r
+     * \r
+     * \r
+     * \r
+     * @param out\r
+     */\r
+    public void marshal(java.io.Writer out)\r
+        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+    {\r
+        \r
+        Marshaller.marshal(this, out);\r
+    } //-- void marshal(java.io.Writer) \r
+\r
+    /**\r
+     * Method marshal\r
+     * \r
+     * \r
+     * \r
+     * @param handler\r
+     */\r
+    public void marshal(org.xml.sax.ContentHandler handler)\r
+        throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+    {\r
+        \r
+        Marshaller.marshal(this, handler);\r
+    } //-- void marshal(org.xml.sax.ContentHandler) \r
+\r
+    /**\r
+     * Method removeAllStructureState\r
+     * \r
+     */\r
+    public void removeAllStructureState()\r
     {\r
-      validate();\r
-    }\r
-    catch (org.exolab.castor.xml.ValidationException vex)\r
+        _structureStateList.removeAllElements();\r
+    } //-- void removeAllStructureState() \r
+\r
+    /**\r
+     * Method removeStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param index\r
+     * @return StructureState\r
+     */\r
+    public jalview.schemabinding.version2.StructureState removeStructureState(int index)\r
+    {\r
+        java.lang.Object obj = _structureStateList.elementAt(index);\r
+        _structureStateList.removeElementAt(index);\r
+        return (jalview.schemabinding.version2.StructureState) obj;\r
+    } //-- jalview.schemabinding.version2.StructureState removeStructureState(int) \r
+\r
+    /**\r
+     * Method setStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param index\r
+     * @param vStructureState\r
+     */\r
+    public void setStructureState(int index, jalview.schemabinding.version2.StructureState vStructureState)\r
+        throws java.lang.IndexOutOfBoundsException\r
+    {\r
+        //-- check bounds for index\r
+        if ((index < 0) || (index > _structureStateList.size())) {\r
+            throw new IndexOutOfBoundsException();\r
+        }\r
+        _structureStateList.setElementAt(vStructureState, index);\r
+    } //-- void setStructureState(int, jalview.schemabinding.version2.StructureState) \r
+\r
+    /**\r
+     * Method setStructureState\r
+     * \r
+     * \r
+     * \r
+     * @param structureStateArray\r
+     */\r
+    public void setStructureState(jalview.schemabinding.version2.StructureState[] structureStateArray)\r
+    {\r
+        //-- copy array\r
+        _structureStateList.removeAllElements();\r
+        for (int i = 0; i < structureStateArray.length; i++) {\r
+            _structureStateList.addElement(structureStateArray[i]);\r
+        }\r
+    } //-- void setStructureState(jalview.schemabinding.version2.StructureState) \r
+\r
+    /**\r
+     * Method unmarshal\r
+     * \r
+     * \r
+     * \r
+     * @param reader\r
+     * @return Object\r
+     */\r
+    public static java.lang.Object unmarshal(java.io.Reader reader)\r
+        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+    {\r
+        return (jalview.schemabinding.version2.Pdbids) Unmarshaller.unmarshal(jalview.schemabinding.version2.Pdbids.class, reader);\r
+    } //-- java.lang.Object unmarshal(java.io.Reader) \r
+\r
+    /**\r
+     * Method validate\r
+     * \r
+     */\r
+    public void validate()\r
+        throws org.exolab.castor.xml.ValidationException\r
     {\r
-      return false;\r
-    }\r
-    return true;\r
-  } //-- boolean isValid()\r
-\r
-  /**\r
-   * Method marshal\r
-   *\r
-   *\r
-   *\r
-   * @param out\r
-   */\r
-  public void marshal(java.io.Writer out)\r
-      throws org.exolab.castor.xml.MarshalException,\r
-      org.exolab.castor.xml.ValidationException\r
-  {\r
-\r
-    Marshaller.marshal(this, out);\r
-  } //-- void marshal(java.io.Writer)\r
-\r
-  /**\r
-   * Method marshal\r
-   *\r
-   *\r
-   *\r
-   * @param handler\r
-   */\r
-  public void marshal(org.xml.sax.ContentHandler handler)\r
-      throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
-      org.exolab.castor.xml.ValidationException\r
-  {\r
-\r
-    Marshaller.marshal(this, handler);\r
-  } //-- void marshal(org.xml.sax.ContentHandler)\r
-\r
-  /**\r
-   * Method unmarshal\r
-   *\r
-   *\r
-   *\r
-   * @param reader\r
-   * @return Object\r
-   */\r
-  public static java.lang.Object unmarshal(java.io.Reader reader)\r
-      throws org.exolab.castor.xml.MarshalException,\r
-      org.exolab.castor.xml.ValidationException\r
-  {\r
-    return (jalview.schemabinding.version2.Pdbids) Unmarshaller.unmarshal(\r
-        jalview.schemabinding.version2.Pdbids.class, reader);\r
-  } //-- java.lang.Object unmarshal(java.io.Reader)\r
-\r
-  /**\r
-   * Method validate\r
-   *\r
-   */\r
-  public void validate()\r
-      throws org.exolab.castor.xml.ValidationException\r
-  {\r
-    org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.\r
-        Validator();\r
-    validator.validate(this);\r
-  } //-- void validate()\r
+        org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+        validator.validate(this);\r
+    } //-- void validate() \r
 \r
 }\r