/*\r
* Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
*\r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
\r
while (i < s.length())\r
{\r
- out[i] = ( (Integer) ResidueProperties.aaHash.get(s.substring(i,\r
- i + 1))).intValue();\r
+ out[i] = ResidueProperties.aaIndex[s.charAt(i)];\r
i++;\r
}\r
\r