Sequence is char []

[jalview.git] / src / jalview / schemes / NucleotideColourScheme.java

diff --git a/src/jalview/schemes/NucleotideColourScheme.java b/src/jalview/schemes/NucleotideColourScheme.java
index 4afb321..899fc60 100755 (executable)
--- a/src/jalview/schemes/NucleotideColourScheme.java
+++ b/src/jalview/schemes/NucleotideColourScheme.java
@@ -44,10 +44,10 @@ public class NucleotideColourScheme extends ResidueColourScheme
      *\r
      * @return DOCUMENT ME!\r
      */\r
-    public Color findColour(String n)\r
+    public Color findColour(char c)\r
     {\r
         // System.out.println("called"); log.debug\r
-        return colors[ResidueProperties.nucleotideIndex[n.charAt(0)]];\r
+        return colors[ResidueProperties.nucleotideIndex[c]];\r
     }\r
 \r
     /**\r
@@ -58,14 +58,14 @@ public class NucleotideColourScheme extends ResidueColourScheme
      *\r
      * @return DOCUMENT ME!\r
      */\r
-    public Color findColour(String n, int j)\r
+    public Color findColour(char c, int j)\r
     {\r
         Color currentColour;\r
-        if ((threshold == 0) || aboveThreshold(n, j))\r
+        if ((threshold == 0) || aboveThreshold(c, j))\r
         {\r
             try\r
             {\r
-                currentColour = colors[ ResidueProperties.nucleotideIndex[n.charAt(0)]];\r
+                currentColour = colors[ ResidueProperties.nucleotideIndex[c]];\r
             }\r
             catch (Exception ex)\r
             {\r