import jalview.datamodel.PDBEntry;
import jalview.datamodel.SearchResults;
import jalview.datamodel.SequenceI;
-import jalview.io.FormatAdapter;
+import jalview.io.AppletFormatAdapter;
import jalview.util.MessageManager;
import java.io.PrintStream;
{
pdb = new MCview.PDBfile(true, parseSecStr, pdbFile, protocol);
if (pdb.id != null && pdb.id.trim().length() > 0
- && FormatAdapter.FILE.equals(protocol))
+ && AppletFormatAdapter.FILE.equals(protocol))
{
registerPDBFile(pdb.id.trim(), pdbFile);
}