import jalview.javascript.json.JSON;
+import java.awt.Dimension;
import java.awt.Toolkit;
import java.awt.event.MouseEvent;
import java.io.BufferedReader;
import java.io.InputStream;
import java.io.InputStreamReader;
import java.io.Reader;
+import java.net.MalformedURLException;
import java.net.URL;
import java.util.Properties;
+import java.util.logging.ConsoleHandler;
+import java.util.logging.Level;
+import java.util.logging.Logger;
+import javax.swing.JComponent;
import javax.swing.SwingUtilities;
import org.json.simple.parser.JSONParser;
import org.json.simple.parser.ParseException;
+import com.stevesoft.pat.Regex;
+
/**
* System platform information used by Applet and Application
*
public static long time, mark, set, duration;
+ /**
+ * typical usage:
+ *
+ * Platform.timeCheck(null, Platform.TIME_MARK);
+ *
+ * ...
+ *
+ * Platform.timeCheck("some message", Platform.TIME_MARK);
+ *
+ * reset...[set/mark]n...get
+ *
+ * @param msg
+ * @param mode
+ */
public static void timeCheck(String msg, int mode)
{
long t = System.currentTimeMillis();
{
case TIME_RESET:
time = mark = t;
+ duration = 0;
if (msg != null)
{
System.err.println("Platform: timer reset\t\t\t" + msg);
case TIME_MARK:
if (set > 0)
{
+ // total time between set/mark points
duration += (t - set);
}
else
case TIME_GET:
if (msg != null)
{
- System.err.println("Platform: timer dur\t" + ((t - time) / 1000f)
+ System.err.println("Platform: timer get\t" + ((t - time) / 1000f)
+ "\t" + ((duration) / 1000f) + "\t" + msg);
}
set = 0;
public static byte[] getFileBytes(File f)
{
- return /** @j2sNative f && f._bytes || */
+ // TODO temporary doubling of 秘bytes and _bytes;
+ // just remove _bytes when new transpiler has been installed
+ return /** @j2sNative f && (f.秘bytes || f._bytes) || */
null;
}
}
@SuppressWarnings("unused")
byte[] bytes = getFileAsBytes(urlstring);
+ // TODO temporary doubling of 秘bytes and _bytes;
+ // just remove _bytes when new transpiler has been installed
/**
- * @j2sNative f._bytes = bytes;
+ * @j2sNative f.秘bytes = f._bytes = bytes;
*/
return true;
}
* @param url
* @return true if window has been opened
*/
- public static boolean openURL(String url)
+ public static boolean openURL(String url) throws IOException
{
if (!isJS())
{
+ BrowserLauncher.openURL(url);
return false;
}
/**
@SuppressWarnings("unused")
ThreadGroup g = Thread.currentThread().getThreadGroup();
/**
- * @j2sNative return g.html5Applet._uniqueId;
+ * @j2sNative return g.秘html5Applet._uniqueId;
*
*/
return null;
String id = getUniqueAppletID();
String key = "", value = "";
/**
- * @j2sNative var info = g.html5Applet.__Info || {}; for (var key in info) {
- * if (key.indexOf(prefix) == 0) { value = "" + info[key];
+ * @j2sNative var info = g.秘html5Applet.__Info || {}; for (var key in info)
+ * { if (key.indexOf(prefix) == 0) { value = "" + info[key];
*/
System.out.println(
"Platform id=" + id + " reading Info." + key + " = " + value);
- p.put(id + "_" + key, value);
+ p.put(key, value);
/**
* @j2sNative
public static void streamToFile(InputStream is, File outFile)
throws IOException
{
+ if (isJS() && /**
+ * JSTempFile direct transfer
+ *
+ * @j2sNative outFile.setBytes$O && outFile.setBytes$O(is) &&
+ */
+ true)
+ {
+ return;
+ }
FileOutputStream fio = new FileOutputStream(outFile);
try
{
- if (isJS()
- && /**
- * @j2sNative outFile.setBytes$O && outFile.setBytes$O(is) &&
- */
- true)
- {
- return;
- }
byte[] bb = new byte[32 * 1024];
int l;
while ((l = is.read(bb)) > 0)
}
+ public static URL getDocumentBase()
+ {
+ try
+ {
+ if (isJS())
+ {
+ @SuppressWarnings("unused")
+ Object g = Thread.currentThread().getThreadGroup();
+ return new URL(/**
+ * @j2sNative g.秘html5Applet._appletPanel.appletDocumentBase
+ * ||
+ */
+ "");
+ }
+ } catch (MalformedURLException e)
+ {
+ }
+ return null;
+ }
+
+ public static URL getCodeBase()
+ {
+ try
+ {
+ if (isJS())
+ {
+ @SuppressWarnings("unused")
+ Object g = Thread.currentThread().getThreadGroup();
+ return new URL(/**
+ * @j2sNative g.秘html5Applet._appletPanel.appletCodeBase
+ * ||
+ */
+ "");
+ }
+ } catch (MalformedURLException e)
+ {
+ }
+ return null;
+ }
+
+ /**
+ * load a resource -- probably a core file -- if and only if a particular
+ * class has not been instantialized. We use a String here because if we used
+ * a .class object, that reference itself would simply load the class, and we
+ * want the core package to include that as well.
+ *
+ * @param resourcePath
+ * @param className
+ */
+ public static void loadStaticResource(Object resourcePath,
+ String className)
+ {
+ /**
+ *
+ * @j2sNative if (!swingjs.JSUtil.isClassLoaded$S(className))
+ * swingjs.JSUtil.loadStaticResource$S(resourcePath);
+ */
+ }
+
+ public static void ensureJmol()
+ {
+ loadStaticResource("core/core_jvjmol.z.js", "org.jmol.viewer.Viewer");
+ }
+
+ public static void ensureRegex()
+ {
+ loadStaticResource("core/core_stevesoft.z.js",
+ "com.stevesoft.pat.Regex");
+ }
+
+ public static Regex newRegex(String searchString, String replaceString)
+ {
+ ensureRegex();
+ return (replaceString == null ? new Regex(searchString)
+ : new Regex(searchString, replaceString));
+ }
+
+ public static Regex newRegexPerl(String code)
+ {
+ ensureRegex();
+ return Regex.perlCode(code);
+ }
+
+ /**
+ * Initialize Java debug logging. A representative sample -- adapt as desired.
+ */
+ public static void startJavaLogging()
+ {
+ /**
+ * @j2sIgnore
+ */
+ {
+ logClass("java.awt.EventDispatchThread", "java.awt.EventQueue",
+ "java.awt.Component", "java.awt.focus.Component",
+ "java.awt.event.Component",
+ "java.awt.focus.DefaultKeyboardFocusManager");
+ }
+ }
+
+ /**
+ * Initiate Java logging for a given class. Only for Java, not JavaScript;
+ * Allows debugging of complex event processing.
+ *
+ * @param className
+ */
+ public static void logClass(String... classNames)
+ {
+ /**
+ * @j2sIgnore
+ *
+ *
+ */
+ {
+ Logger rootLogger = Logger.getLogger("");
+ rootLogger.setLevel(Level.ALL);
+ ConsoleHandler consoleHandler = new ConsoleHandler();
+ consoleHandler.setLevel(Level.ALL);
+ for (int i = classNames.length; --i >= 0;)
+ {
+ Logger logger = Logger.getLogger(classNames[i]);
+ logger.setLevel(Level.ALL);
+ logger.addHandler(consoleHandler);
+ }
+ }
+ }
+
+ /**
+ * Set the "app" property of the HTML5 applet object, for example,
+ * "testApplet.app", to point to the Jalview instance. This will be the object
+ * that page developers use that is similar to the original Java applet object
+ * that was accessed via LiveConnect.
+ *
+ * @param j
+ */
+ public static void setAppClass(Object j)
+ {
+ if (!isJS())
+ {
+ return;
+ }
+ @SuppressWarnings("unused")
+ Thread t = Thread.currentThread();
+ /**
+ * Set up "testApplet.app" to be this instance
+ *
+ * @j2sNative
+ *
+ * try {self[t.name].app = j}catch(e){}
+ */
+ }
+
+ /**
+ * Retrieve the object's embedded size from a div's style on a page if
+ * embedded in SwingJS.
+ *
+ * @param frame
+ * JFrame or JInternalFrame
+ * @param defaultWidth
+ * use -1 to return null (no default size)
+ * @param defaultHeight
+ * @return the embedded dimensions or null (no default size or not embedded)
+ */
+ public static Dimension getDimIfEmbedded(JComponent frame,
+ int defaultWidth, int defaultHeight)
+ {
+ Dimension d = /** @j2sNative frame.ui.getEmbedded$S("dim") || */
+ null;
+ return (d == null && defaultWidth >= 0
+ ? new Dimension(defaultWidth, defaultHeight)
+ : d);
+ }
+
+ /**
+ *
+ * If this frame Is this frame embedded in a web page, return a known type.
+ *
+ * @param frame
+ * a JFrame or JInternalFrame
+ * @param type
+ * @return null if frame is not embedded.
+ */
+ public static Object getEmbeddedAttribute(Object frame, String type)
+ {
+ if (!isJS())
+ {
+ return null;
+ }
+ return (/** @j2sNative frame.ui.getEmbedded$S(type) || */
+ null);
+ }
+
+ public static void stackTrace()
+ {
+ try
+ {
+ throw new NullPointerException();
+ } catch (Exception e)
+ {
+ e.printStackTrace();
+ }
+
+ }
+
+
}
git://source.jalview.org / jalview.git / blobdiff