* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
-package jalview.ws;
-import java.util.Hashtable;
+*/\r
+package jalview.ws;\r
+\r
+import java.util.Hashtable;\r
+\r
+\r
/**
* <p>Title: MsaWServices </p>
*
*
* @author not attributable
* @version 1.0
- */
+ */\r
/**
* TODO: MsaWServices will be set from properties and be dynamically discovered.
- */
-public class MsaWServices {
- public static Hashtable info;
- static
- {
- info = new Hashtable();
- info.put("ClustalWS",
- new String[]
- {
- "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS",
- "ClustalW Alignment job",
- "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" +
- " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice."
- + " Nucleic Acids Research, submitted, June 1994."
- });
- info.put("MuscleWS",
- new String[]
- {
- "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS",
- "Muscle Alignment job",
- "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment "
- +
- "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97."
- });
- };
-}
+ */\r
+public class MsaWServices {\r
+ public static Hashtable info;\r
+\r
+ static {\r
+ info = new Hashtable();\r
+ info.put("ClustalWS",\r
+ new String[] {\r
+ "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS",\r
+ "ClustalW Alignment job",\r
+ \r
+ "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" +\r
+ " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice." +\r
+ " Nucleic Acids Research, submitted, June 1994."\r
+ });\r
+ info.put("MuscleWS",\r
+ new String[] {\r
+ "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS",\r
+ "Muscle Alignment job",\r
+ \r
+ "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment " +\r
+ "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97."\r
+ });\r
+ }\r
+}\r