apply version 2.7 copyright

[jalview.git] / src / jalview / ws / dbsources / Pfam.java

diff --git a/src/jalview/ws/dbsources/Pfam.java b/src/jalview/ws/dbsources/Pfam.java
index 7a99213..8ce586a 100644 (file)
--- a/src/jalview/ws/dbsources/Pfam.java
+++ b/src/jalview/ws/dbsources/Pfam.java
@@ -1,20 +1,19 @@
 /*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)\r
- * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)\r
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
  * \r
- * This program is free software; you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License\r
- * as published by the Free Software Foundation; either version 2\r
- * of the License, or (at your option) any later version.\r
+ * This file is part of Jalview.\r
  * \r
- * This program is distributed in the hope that it will be useful,\r
- * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
- * GNU General Public License for more details.\r
+ * Jalview is free software: you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License \r
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.\r
  * \r
- * You should have received a copy of the GNU General Public License\r
- * along with this program; if not, write to the Free Software\r
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
+ * Jalview is distributed in the hope that it will be useful, but \r
+ * WITHOUT ANY WARRANTY; without even the implied warranty \r
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR \r
+ * PURPOSE.  See the GNU General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.\r
  */\r
 package jalview.ws.dbsources;\r
 \r
@@ -47,6 +46,7 @@ abstract public class Pfam extends DbSourceProxyImpl implements
     super();\r
     // all extensions of this PFAM source base class are DOMAINDB sources\r
     addDbSourceProperty(jalview.datamodel.DBRefSource.DOMAINDB);\r
+    addDbSourceProperty(jalview.datamodel.DBRefSource.ALIGNMENTDB);\r
   }\r
 \r
   /*\r
@@ -75,17 +75,17 @@ abstract public class Pfam extends DbSourceProxyImpl implements
    * (non-Javadoc)\r
    * \r
    * @see jalview.ws.DbSourceProxy#getDbSource() public String getDbSource() { *\r
-   *      this doesn't work - DbSource is key for the hash of DbSourceProxy\r
-   *      instances - 1:many mapping for DbSource to proxy will be lost. *\r
-   *      suggest : PFAM is an 'alignment' source - means proxy is higher level\r
-   *      than a sequence source. return jalview.datamodel.DBRefSource.PFAM; }\r
+   * this doesn't work - DbSource is key for the hash of DbSourceProxy instances\r
+   * - 1:many mapping for DbSource to proxy will be lost. * suggest : PFAM is an\r
+   * 'alignment' source - means proxy is higher level than a sequence source.\r
+   * return jalview.datamodel.DBRefSource.PFAM; }\r
    */\r
 \r
   /*\r
    * (non-Javadoc)\r
    * \r
    * @see jalview.ws.DbSourceProxy#getDbSourceProperties() public Hashtable\r
-   *      getDbSourceProperties() {\r
+   * getDbSourceProperties() {\r
    * \r
    * return null; }\r
    */\r