JAL-3210 Improvements to eclipse detection. New src tree and SwingJS updated from...

[jalview.git] / src / jalview / ws / dbsources / PfamSeed.java

diff --git a/src/jalview/ws/dbsources/PfamSeed.java b/src/jalview/ws/dbsources/PfamSeed.java
index 2ea75af..e4662e1 100644 (file)
--- a/src/jalview/ws/dbsources/PfamSeed.java
+++ b/src/jalview/ws/dbsources/PfamSeed.java
@@ -20,7 +20,7 @@
  */
 package jalview.ws.dbsources;
 
-import jalview.ws.seqfetcher.DbSourceProxy;
+import jalview.datamodel.DBRefSource;
 
 /**
  * flyweight class specifying retrieval of Seed alignments from PFAM
@@ -28,21 +28,17 @@ import jalview.ws.seqfetcher.DbSourceProxy;
  * @author JimP
  * 
  */
-public class PfamSeed extends Pfam implements DbSourceProxy
+public class PfamSeed extends Pfam
 {
   public PfamSeed()
   {
     super();
   }
 
-  /*
-   * (non-Javadoc)
-   * 
-   * @see jalview.ws.dbsources.Pfam#getPFAMURL()
-   */
-  protected String getXFAMURL()
+  @Override
+  public String getURLSuffix()
   {
-    return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=seed&format=stockholm&order=t&case=l&gaps=default&entry=";
+    return "/alignment/seed";
   }
 
   /*
@@ -50,16 +46,19 @@ public class PfamSeed extends Pfam implements DbSourceProxy
    * 
    * @see jalview.ws.seqfetcher.DbSourceProxy#getDbName()
    */
+  @Override
   public String getDbName()
   {
-    return "PFAM (Seed)";
+    return DBRefSource.PFAM_SEED;
   }
 
+  @Override
   public String getDbSource()
   {
     return jalview.datamodel.DBRefSource.PFAM; // archetype source
   }
 
+  @Override
   public String getTestQuery()
   {
     return "PF03760";