JAL-2885 uniprot now https, uniprot/ensembl/pfam/xfam configurable

[jalview.git] / src / jalview / ws / dbsources / RfamSeed.java

diff --git a/src/jalview/ws/dbsources/RfamSeed.java b/src/jalview/ws/dbsources/RfamSeed.java
index 1c8582b..a74e829 100644 (file)
--- a/src/jalview/ws/dbsources/RfamSeed.java
+++ b/src/jalview/ws/dbsources/RfamSeed.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -33,23 +33,11 @@ public class RfamSeed extends Rfam
     super();
   }
 
-  /*
-   * (non-Javadoc)
-   * 
-   * @see jalview.ws.dbsources.Rfam#getRFAMURL()
-   */
-  @Override
-  protected String getXFAMURL()
-  {
-    return "http://rfam.xfam.org/family/";
-    // Janelia Farms url
-    // "http://rfam.janelia.org/cgi-bin/getalignment?type=seed&fmt=stockholm&acc=";
-  }
-
   @Override
-  public String getXFAMURLSUFFIX()
+  public String getURLSuffix()
   {
-    return "/alignment";
+    // to download gzipped file add '?gzip=1'
+    return "/alignment/stockholm";
   }
 
   /*