import javax.swing.JMenu;
import javax.swing.JMenuItem;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
import org.apache.log4j.Level;
import jalview.bin.Cache;
import jalview.datamodel.AlignmentView;
import jalview.gui.AlignFrame;
+import jalview.gui.Desktop;
import jalview.ws.WSMenuEntryProviderI;
+import jalview.ws.params.ParamDatastoreI;
import compbio.data.msa.MsaWS;
import compbio.metadata.Option;
import compbio.metadata.Preset;
}
System.out.println("Discovered service: " + jwsservers + " "
+ srv.toString());
- services.add(new Jws2Instance(jwsservers, srv.toString(), service2));
+ Jws2Instance service = new Jws2Instance(jwsservers, srv.toString(), service2);
+
+ services.add(service);
+ service.getParamStore();
}
public class Jws2Instance
PresetManager presets = null;
+ public JabaParamStore paramStore = null;
+
/**
* non thread safe - gets the presets for this service (blocks whilst it
* calls the service to get the preset set)
}
super.finalize();
}
+
+ public ParamDatastoreI getParamStore()
+ {
+ if (paramStore == null)
+ {
+ try
+ {
+ paramStore = new JabaParamStore(this,
+ (Desktop.instance != null ? Desktop
+ .getUserParameterStore() : null));
+ } catch (Exception ex)
+ {
+ }
+
+ }
+ return paramStore;
+ }
+
+ public String getUri()
+ {
+ // this is only valid for Jaba 1.0 - this formula might have to change!
+ return hosturl+"/"+serviceType;
+ }
};
/**
public void attachWSMenuEntry(JMenu wsmenu, final AlignFrame alignFrame)
{
+ // dynamically regenerate service list.
+ final JMenu jws2al = new JMenu("JABA Alignment");
+ jws2al.addMenuListener(new MenuListener()
+ {
+ // TODO: future: add menu listener to parent menu - so submenus are
+ // populated *before* they are selected.
+ @Override
+ public void menuSelected(MenuEvent e)
+ {
+ populateWSMenuEntry(jws2al, alignFrame);
+ }
+
+ @Override
+ public void menuDeselected(MenuEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ @Override
+ public void menuCanceled(MenuEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ });
+ wsmenu.add(jws2al);
+
+ }
+
+ private void populateWSMenuEntry(JMenu jws2al, final AlignFrame alignFrame)
+ {
if (running || services == null || services.size() == 0)
{
return;
* eventually, JWS2 services will appear under the same align/etc submenus.
* for moment we keep them separate.
*/
- JMenu atpoint, jws2al = new JMenu("JABA Alignment");
+ JMenu atpoint;
MsaWSClient msacl = new MsaWSClient();
Vector hostLabels = new Vector();
+ jws2al.removeAll();
+ String lasthost=null;
for (final Jws2Instance service : services)
{
atpoint = jws2al;
// group
JMenuItem hitm;
atpoint.addSeparator();
- atpoint.add(hitm = new JMenuItem(host));
- hitm.setForeground(Color.blue);
- hostLabels.addElement(host);
+ if (lasthost==null || !lasthost.equals(host))
+ {
+ atpoint.add(hitm = new JMenuItem(host));
+ hitm.setForeground(Color.blue);
+ }
+ hostLabels.addElement(lasthost=host);
}
msacl.attachWSMenuEntry(atpoint, service, alignFrame);
/*
* alignFrame); } });
*/
}
- if (services.size() > 0)
- {
- wsmenu.add(jws2al);
- }
-
}
public static void main(String[] args)
/**
* test the given URL with the JabaWS test code
+ *
* @param foo
* @return
*/
public static boolean testServiceUrl(URL foo)
{
- try {
- compbio.ws.client.WSTester.main(new String[] { "-h="+foo.toString()});
+ try
+ {
+ compbio.ws.client.WSTester.main(new String[]
+ { "-h=" + foo.toString() });
} catch (Exception e)
{
return false;
- }
- catch (OutOfMemoryError e)
+ } catch (OutOfMemoryError e)
{
return false;
- }
- catch (Error e)
+ } catch (Error e)
{
return false;
}