// TODO: get the parameters (if any) for this job and submit the job
if (j.arguments!=null && j.arguments.size()>0)
{
+ StringBuffer pset = new StringBuffer();
+ for (Argument arg: j.arguments) {
+ pset.append(arg.getName()+" "+arg.getDefaultValue()+"\n");
+ }
+ j.setStatus("Custom Parameters:\n"+pset.toString()+"\nJob Output:\n");
j.setJobId(server.customAlign(j.seqs, j.arguments));
} else
if (j.preset!=null)